RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1112809", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1112809 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7871718 7871718 PRJNA1112809_P_NODE_118287_length_299_cov_2.504425_g115012_i0 PRJNA1112809 118287 299 2.504425 7.48823075 Hodnevirus arvenecus 3429420 Viruses Viruses 206 2.02e-48   NTclustered gi|2497516987|ref|NC_074588.1| 2786153 g115012 i0 80.069 0.973244147157191 291 47 95 7 17 299 323 36 SsRNA phage Gephyllon.3_13 genomic sequence blastn 291 206 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Hodnevirus Hodnevirus arvenecus
27920681 27920681 PRJNA1112809_P_NODE_182885_length_244_cov_2.298246_g179610_i0 PRJNA1112809 182885 244 2.298246 5.60772024 Yanbian Narna tick virus 1 2972247 Viruses Viruses 67.4 7.85e-11   NR UYL95396.1 2972247 g179610 i0 54.8 0.762295081967213 62 25 72.5 1 67 243 421 482 UYL95396.1 MAG: RNA-dependent RNA polymerase [Yanbian Narna tick virus 1] diamond 186 67.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Yanbian Narna tick virus 1
28710293 28710293 PRJNA1112809_P_NODE_85367_length_366_cov_2.525597_g82092_i0 PRJNA1112809 85367 366 2.525597 9.24368502 Mitoviridae sp. 2809572 Viruses Viruses 46.2 0.00883   NR WAK72391.1 2809572 g82092 i0 34.7 0.614754098360656 75 49 61.5 0 364 140 511 585 WAK72391.1 MAG: RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 225 46.2 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;