RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1112809" and tax_phylum = "Hofneiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1112809 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4046865 4046865 PRJNA1112809_P_NODE_180004_length_245_cov_2.215116_g176729_i0 PRJNA1112809 180004 245 2.215116 5.4270342 Inoviridae sp. 2219103 Viruses Viruses 206 1.6e-48   NTclustered gi|2906143529|gb|PQ646045.1| 2219103 g176729 i0 86.01 0.787755102040816 193 25 78 2 54 245 4170 3979 MAG: Inoviridae sp. isolate k127_1042531 genomic sequence blastn 193 206 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;