RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1112809" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1112809 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29341679 29341679 PRJNA1112809_P_NODE_189429_length_242_cov_1.272189_g186154_i0 PRJNA1112809 189429 242 1.272189 3.07869738 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 159 1.6499999999999999e-43   NR CAI9858976.1 3048757 g186154 i0 95 0.991735537190083 80 4 99.2 0 240 1 205 284 CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] diamond 240 159 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1
29341731 29341731 PRJNA1112809_P_NODE_86009_length_365_cov_0.941781_g82734_i0 PRJNA1112809 86009 365 0.941781 3.43750065 Totiviridae sp. 1955172 Viruses Viruses 156 1.19e-41   NR WAK77569.1 1955172 g82734 i0 64.4 0.96986301369863 118 42 97 0 355 2 22 139 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 354 156 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
31458534 31458534 PRJNA1112809_P_NODE_171776_length_248_cov_1.754286_g168501_i0 PRJNA1112809 171776 248 1.754286 4.35062928 Totiviridae sp. 1955172 Viruses Viruses 106 1.75e-24   NR WAK77569.1 1955172 g168501 i0 57.3 0.991935483870968 82 35 99.2 0 2 247 462 543 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 246 106 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;