RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1112809" and tax_phylum = "Candidatus Zixiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1112809 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23171563 23171563 PRJNA1112809_P_NODE_137999_length_276_cov_1.064039_g134724_i0 PRJNA1112809 137999 276 1.064039 2.93674764 uncultured candidate division Zixibacteria bacterium 1664345 Bacteria Bacteria 206 1.84e-48   NTclustered gi|2874253775|emb|OY969724.1| 1664345 g134724 i0 84.541 26.6594202898551 207 32 75 0 43 249 2916140 2915934 MAG: uncultured candidate division Zixibacteria bacterium isolate MFD02416.bin.2.48 genome assembly, chromosome: 1 blastn 7358 206 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         uncultured candidate division Zixibacteria bacterium
29467456 29467456 PRJNA1112809_P_NODE_110650_length_311_cov_2.046218_g107375_i0 PRJNA1112809 110650 311 2.046218 6.36373798 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 171 8.919999999999998e-47   NR MEW5993099.1 2053527 g107375 i0 80.6 1.98713826366559 103 20 99.4 0 309 1 158 260 MEW5993099.1 CusA/CzcA family heavy metal efflux RND transporter [Candidatus Zixiibacteriota bacterium] diamond 618 171 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;