RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1112809" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1112809 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2769819 2769819 PRJNA1112809_P_NODE_135363_length_278_cov_2.902439_g132088_i0 PRJNA1112809 135363 278 2.902439 8.06878042 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 115 2.33e-28   NR MDX1972806.1 2715255 g132088 i0 56.5 0.91726618705036 85 37 91.7 0 277 23 264 348 MDX1972806.1 deoxyribodipyrimidine photolyase [Candidatus Sumerlaeia bacterium] diamond 255 115 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
26656211 26656211 PRJNA1112809_P_NODE_97941_length_335_cov_2.343511_g94666_i0 PRJNA1112809 97941 335 2.343511 7.85076185 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 132 3.91e-33   NR MCC6546029.1 2107588 g94666 i0 59.5 0.994029850746269 111 41 99.4 2 333 1 266 372 MCC6546029.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 333 132 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
27036299 27036299 PRJNA1112809_P_NODE_67162_length_433_cov_1.513889_g63888_i0 PRJNA1112809 67162 433 1.513889 6.55513937 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 136 4.69e-34   NR MCC6546029.1 2107588 g63888 i0 51.4 1.01154734411085 146 67 99.8 2 2 433 71 214 MCC6546029.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 438 136 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
28678715 28678715 PRJNA1112809_P_NODE_81667_length_377_cov_3.101974_g78392_i0 PRJNA1112809 81667 377 3.101974 11.69444198 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 83.6 9.02e-16   NR MCC6546029.1 2107588 g78392 i0 42.2 0.923076923076923 116 65 92.3 2 2 349 429 542 MCC6546029.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 348 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31647941 31647941 PRJNA1112809_P_NODE_183377_length_244_cov_1.520468_g180102_i0 PRJNA1112809 183377 244 1.520468 3.70994192 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 67.4 7.69e-11   NR MCC6546029.1 2107588 g180102 i0 42.7 1.00819672131148 82 38 89.8 1 242 24 565 646 MCC6546029.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 246 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
32186026 32186026 PRJNA1112809_P_NODE_150278_length_263_cov_1.621053_g147003_i0 PRJNA1112809 150278 263 1.621053 4.26336939 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 163 8.479999999999999e-45   NR MCX7048562.1 2107588 g147003 i0 80.2 4.91634980988593 86 17 98.1 0 258 1 512 597 MCX7048562.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Sumerlaeota bacterium] diamond 1293 163 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;