RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1112809" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1112809 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
219989 219989 PRJNA1112809_P_NODE_182781_length_244_cov_2.678363_g179506_i0 PRJNA1112809 182781 244 2.678363 6.53520572 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 348 2.51e-91   NTclustered gi|820695469|tpe|LN714488.1| 572307 g179506 i0 93.22 44.4754098360656 236 16 97 0 1 236 116600 116365 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10852 348 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
2769696 2769696 PRJNA1112809_P_NODE_127723_length_287_cov_1.439252_g124448_i0 PRJNA1112809 127723 287 1.439252 4.13065324 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 303 6.64e-78   NTclustered gi|820695469|tpe|LN714488.1| 572307 g124448 i0 92.488 30.6062717770035 213 15 98 1 1 213 300530 300319 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8784 303 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14248927 14248927 PRJNA1112809_P_NODE_177492_length_246_cov_1.653179_g174217_i0 PRJNA1112809 177492 246 1.653179 4.06682034 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 237 5.72e-58   NTclustered gi|820695469|tpe|LN714488.1| 572307 g174217 i0 84.979 9.07317073170732 233 35 100 0 14 246 96457 96225 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2232 237 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21896454 21896454 PRJNA1112809_P_NODE_155878_length_258_cov_1.529730_g152603_i0 PRJNA1112809 155878 258 1.52973 3.9467034 Cryptosporidium hominis 237895 SAR_Eukaryotes SAR_Eukaryotes 460 3.29e-125   NTclustered gi|67586105|ref|XM_660074.1| 353151 g152603 i0 98.842 6.03875968992248 259 1 100 2 1 258 1095 838 Cryptosporidium hominis TU502 sensor histidine kinase (Chro.00003) partial mRNA blastn 1558 460 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
23172066 23172066 PRJNA1112809_P_NODE_163919_length_251_cov_1.224719_g160644_i0 PRJNA1112809 163919 251 1.224719 3.07404469 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 176 1.2899999999999999e-39   NTclustered gi|820695469|tpe|LN714488.1| 572307 g160644 i0 94.017 32.6374501992032 117 5 70 2 76 192 300012 299898 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8192 176 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24445753 24445753 PRJNA1112809_P_NODE_160500_length_254_cov_1.237569_g157225_i0 PRJNA1112809 160500 254 1.237569 3.14342526 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|915123824|ref|XM_013477722.1| 5804 g157225 i0 100 0.110236220472441 28 0 11 0 161 188 2407 2434 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
28426020 28426020 PRJNA1112809_P_NODE_136706_length_277_cov_1.509804_g133431_i0 PRJNA1112809 136706 277 1.509804 4.18215708 Plasmodium knowlesi strain H 5851 SAR_Eukaryotes SAR_Eukaryotes 65.9 3.96e-10   NR XP_002257651.1 5851 g133431 i0 55.1 4.77617328519856 49 21 53.1 1 275 129 130 177 XP_002257651.1 serine/threonine protein phosphatase 2B catalytic subunit A, putative [Plasmodium knowlesi strain H] diamond 1323 65.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;