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contig_metadata

24 rows where bioproject = "PRJNA1112809", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 24 ✖

tax_kingdom 1

  • Bacillati · 24 ✖

bioproject 1

  • PRJNA1112809 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6599277 6599277 PRJNA1112809_P_NODE_63566_length_451_cov_1.910053_g60292_i0 PRJNA1112809 63566 451 1.910053 8.61433903 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 56.5 0.003   NTclustered gi|2874253689|emb|OY969415.1| 157466 g60292 i0 100 0.0665188470066519 30 0 7 0 76 105 2217846 2217875 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
8676885 8676885 PRJNA1112809_P_NODE_82727_length_374_cov_2.013289_g79452_i0 PRJNA1112809 82727 374 2.013289 7.52970086 Fimbriimonas 1005038 Bacteria Bacteria 496 1.37e-135   NTclustered gi|663071213|gb|CP007139.1| 661478 g79452 i0 91.057 259.090909090909 369 29 98 4 1 367 28781 29147 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 96900 496 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
14247973 14247973 PRJNA1112809_P_NODE_126212_length_289_cov_1.143519_g122937_i0 PRJNA1112809 126212 289 1.143519 3.30476991 Armatimonadota bacterium 2033014 Bacteria Bacteria 185 3.54e-52   NR MDQ2800140.1 2033014 g122937 i0 88.2 1.95155709342561 93 11 96.5 0 281 3 31 123 MDQ2800140.1 GH92 family glycosyl hydrolase [Armatimonadota bacterium] diamond 564 185 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
24445252 24445252 PRJNA1112809_P_NODE_133080_length_281_cov_1.360577_g129805_i0 PRJNA1112809 133080 281 1.360577 3.82322137 uncultured Fimbriimonas sp. 1936177 Bacteria Bacteria 518 2.13e-142   NTclustered gi|2329044906|gb|OP833538.1| 1936177 g129805 i0 100 99.2953736654804 280 0 99 0 2 281 281 2 Uncultured Fimbriimonas sp. clone OTU29655 16S ribosomal RNA gene, partial sequence blastn 27902 518 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas uncultured Fimbriimonas sp.
24447161 24447161 PRJNA1112809_P_NODE_57720_length_485_cov_1.990291_g54449_i0 PRJNA1112809 57720 485 1.990291 9.65291135 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 95.3 7.74e-15   NTclustered gi|2874254000|emb|OY970325.1| 157466 g54449 i0 77.778 10.8680412371134 162 30 33 4 327 485 914527 914369 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 5271 95.3 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
26963992 26963992 PRJNA1112809_P_NODE_30462_length_820_cov_2.226238_g27423_i0 PRJNA1112809 30462 820 2.226238 18.2551516 Bacteria 2 Bacteria Bacteria 150 1.8e-40   NR HHX38525.1 2033014 g27423 i0 45.4 9.2890243902439 205 108 75 2 644 30 34 234 HHX38525.1 glycosyltransferase family 4 protein [Armatimonadota bacterium] diamond 7617 150 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27036296 27036296 PRJNA1112809_P_NODE_65282_length_442_cov_2.086721_g62008_i0 PRJNA1112809 65282 442 2.086721 9.22330682 Armatimonadota bacterium 2033014 Bacteria Bacteria 45.8 0.0199   NR HCA48623.1 2033014 g62008 i0 39.4 0.481900452488688 71 40 46.2 2 240 37 236 306 HCA48623.1 hypothetical protein [Armatimonadota bacterium] diamond 213 45.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27478724 27478724 PRJNA1112809_P_NODE_61643_length_461_cov_2.134021_g58370_i0 PRJNA1112809 61643 461 2.134021 9.83783681 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 227 7.880000000000001e-71   NR MCW3100778.1 2739509 g58370 i0 75.7 0.989154013015184 152 37 98.9 0 460 5 207 358 MCW3100778.1 interphotoreceptor retinoid-binding protein [Chthonomonadaceae bacterium] diamond 456 227 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27763166 27763166 PRJNA1112809_P_NODE_65264_length_442_cov_2.211382_g61990_i0 PRJNA1112809 65264 442 2.211382 9.77430844 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 160 2.27e-48   NR MBX7134038.1 2682144 g61990 i0 85.7 1.23529411764706 91 13 61.8 0 348 76 1 91 MBX7134038.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 546 160 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28110031 28110031 PRJNA1112809_P_NODE_146585_length_267_cov_1.190722_g143310_i0 PRJNA1112809 146585 267 1.190722 3.17922774 Armatimonas sp. 1872638 Bacteria Bacteria 124 7.539999999999999e-31   NR WP_394796223.1 1872638 g143310 i0 71.6 1.97752808988764 88 25 98.9 0 3 266 344 431 WP_394796223.1 bifunctional diguanylate cyclase/phosphodiesterase [Armatimonas sp.] diamond 528 124 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
28164529 28164529 PRJNA1112809_P_NODE_171445_length_248_cov_2.342857_g168170_i0 PRJNA1112809 171445 248 2.342857 5.81028536 Bacteria 2 Bacteria Bacteria 147 5.9299999999999986e-40   NR MCX6376462.1 2033014 g168170 i0 84.8 2.91532258064516 79 12 95.6 0 237 1 387 465 MCX6376462.1 DNA cytosine methyltransferase [Armatimonadota bacterium] diamond 723 147 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28299504 28299504 PRJNA1112809_P_NODE_108906_length_314_cov_2.352697_g105631_i0 PRJNA1112809 108906 314 2.352697 7.38746858 Chthonomonadales bacterium 2282151 Bacteria Bacteria 44.3 0.0243   NR MEP6756523.1 2282151 g105631 i0 53.6 0.535031847133758 56 24 53.5 1 147 314 1 54 MEP6756523.1 alpha-N-arabinofuranosidase [Chthonomonadales bacterium] diamond 168 44.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
28353898 28353898 PRJNA1112809_P_NODE_80246_length_382_cov_1.744337_g76971_i0 PRJNA1112809 80246 382 1.744337 6.66336734 Bacteria 2 Bacteria Bacteria 123 3.37e-30   NR MBP8951372.1 2033014 g76971 i0 53.5 3.66753926701571 114 53 89.5 0 1 342 383 496 MBP8951372.1 UbiA family prenyltransferase [Armatimonadota bacterium] diamond 1401 123 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28489189 28489189 PRJNA1112809_P_NODE_99087_length_333_cov_1.476923_g95812_i0 PRJNA1112809 99087 333 1.476923 4.91815359 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 108 6.74e-25   NR MBI3721396.1 1005039 g95812 i0 58.2 0.990990990990991 110 43 97.3 3 333 10 441 549 MBI3721396.1 choice-of-anchor D domain-containing protein [Fimbriimonas ginsengisoli] diamond 330 108 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29332749 29332749 PRJNA1112809_P_NODE_63589_length_451_cov_1.703704_g60315_i0 PRJNA1112809 63589 451 1.703704 7.68370504 Bacteria 2 Bacteria Bacteria 52.4 1.54e-4   NR PIZ39304.1 1973908 g60315 i0 38.7 2.82039911308204 106 62 69.2 3 92 403 969 1073 PIZ39304.1 MAG: hemagglutinin, partial [Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14] diamond 1272 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14
29562516 29562516 PRJNA1112809_P_NODE_72590_length_410_cov_1.121662_g69315_i0 PRJNA1112809 72590 410 1.121662 4.5988142 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 179 5.88e-54   NR MFI5386238.1 2682145 g69315 i0 58.1 0.995121951219512 136 56 99.5 1 409 2 67 201 MFI5386238.1 class I SAM-dependent methyltransferase [Fimbriimonadales bacterium] diamond 408 179 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29932844 29932844 PRJNA1112809_P_NODE_122531_length_293_cov_2.386364_g119256_i0 PRJNA1112809 122531 293 2.386364 6.99204652 Bacteria 2 Bacteria Bacteria 157 3.99e-44   NR MBI3722168.1 1005039 g119256 i0 71.1 3.97269624573379 97 28 99.3 0 293 3 91 187 MBI3722168.1 YncE family protein [Fimbriimonas ginsengisoli] diamond 1164 157 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
30763126 30763126 PRJNA1112809_P_NODE_66754_length_435_cov_1.276243_g63480_i0 PRJNA1112809 66754 435 1.276243 5.55165705 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 63.9 5.15e-10   NR HLV80740.1 2739509 g63480 i0 49.2 0.406896551724138 59 30 40.7 0 188 12 2 60 HLV80740.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 177 63.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30826081 30826081 PRJNA1112809_P_NODE_113254_length_307_cov_1.807692_g109979_i0 PRJNA1112809 113254 307 1.807692 5.54961444 Chthonomonadales bacterium 2282151 Bacteria Bacteria 81.6 3.26e-16   NR HEV2471409.1 2282151 g109979 i0 69.2 0.50814332247557 52 16 50.8 0 307 152 201 252 HEV2471409.1 tetratricopeptide repeat protein [Chthonomonadales bacterium] diamond 156 81.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
31173403 31173403 PRJNA1112809_P_NODE_158175_length_256_cov_1.377049_g154900_i0 PRJNA1112809 158175 256 1.377049 3.52524544 Capsulimonadaceae bacterium 2953755 Bacteria Bacteria 92 3.61e-20   NR HEX5323351.1 2953755 g154900 i0 60.9 2.42578125 69 27 80.9 0 3 209 230 298 HEX5323351.1 hypothetical protein [Capsulimonadaceae bacterium] diamond 621 92 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae   Capsulimonadaceae bacterium
31449621 31449621 PRJNA1112809_P_NODE_146156_length_267_cov_1.752577_g142881_i0 PRJNA1112809 146156 267 1.752577 4.67938059 Bacteria 2 Bacteria Bacteria 79.7 4.55e-15   NR WP_348220587.1 2494211 g142881 i0 50 2.93258426966292 86 37 96.6 1 265 8 117 196 WP_348220587.1 hypothetical protein [Capsulimonas sp.] diamond 783 79.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
31490267 31490267 PRJNA1112809_P_NODE_63916_length_449_cov_2.345745_g60642_i0 PRJNA1112809 63916 449 2.345745 10.53239505 Armatimonadota bacterium 2033014 Bacteria Bacteria 150 2.68e-39   NR HEY3416850.1 2033014 g60642 i0 52.6 2.0445434298441 152 69 99.6 2 3 449 35 186 HEY3416850.1 HAD-IIIC family phosphatase [Armatimonadota bacterium] diamond 918 150 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32050518 32050518 PRJNA1112809_P_NODE_170418_length_249_cov_0.875000_g167143_i0 PRJNA1112809 170418 249 0.875 2.17875 PVC group 1783257 Bacteria Bacteria 55.5 1.31e-6   NR WP_184192674.1 685828 g167143 i0 40.3 3.51807228915663 77 46 92.8 0 5 235 69 145 WP_184192674.1 hypothetical protein [Armatimonas rosea] diamond 876 55.8 0.99462365591397806 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
32502621 32502621 PRJNA1112809_P_NODE_181499_length_245_cov_0.895349_g178224_i0 PRJNA1112809 181499 245 0.895349 2.19360505 Armatimonadota bacterium 2033014 Bacteria Bacteria 121 6.72e-32   NR MBC8136565.1 2033014 g178224 i0 81.5 0.991836734693878 81 15 99.2 0 3 245 114 194 MBC8136565.1 hypothetical protein [Armatimonadota bacterium] diamond 243 121 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;