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contig_metadata

31 rows where bioproject = "PRJNA1112809" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 31 ✖

bioproject 1

  • PRJNA1112809 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
219989 219989 PRJNA1112809_P_NODE_182781_length_244_cov_2.678363_g179506_i0 PRJNA1112809 182781 244 2.678363 6.53520572 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 348 2.51e-91   NTclustered gi|820695469|tpe|LN714488.1| 572307 g179506 i0 93.22 44.4754098360656 236 16 97 0 1 236 116600 116365 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10852 348 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
221389 221389 PRJNA1112809_P_NODE_77941_length_390_cov_1.432177_g74666_i0 PRJNA1112809 77941 390 1.432177 5.5854903 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 72.4 8.67e-14   NR YP_010131744.1 376140 g74666 i0 44.2 2.84615384615385 77 43 59.2 0 5 235 10 86 YP_010131744.1 ribosomal protein S19 [Thalassiosira profunda] diamond 1110 72.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira profunda
2769696 2769696 PRJNA1112809_P_NODE_127723_length_287_cov_1.439252_g124448_i0 PRJNA1112809 127723 287 1.439252 4.13065324 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 303 6.64e-78   NTclustered gi|820695469|tpe|LN714488.1| 572307 g124448 i0 92.488 30.6062717770035 213 15 98 1 1 213 300530 300319 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8784 303 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
2769975 2769975 PRJNA1112809_P_NODE_143803_length_269_cov_3.137755_g140528_i0 PRJNA1112809 143803 269 3.137755 8.44056095 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 497 2.63e-136   NTclustered gi|1628762178|gb|MK868185.1| 187299 g140528 i0 100 100.2156133829 269 0 100 0 1 269 110 378 Uncultured ciliate clone TFA3.22 small subunit ribosomal RNA gene, partial sequence blastn 26958 497 1 Eukaryota Sar   Ciliophora         uncultured ciliate
8676521 8676521 PRJNA1112809_P_NODE_152407_length_261_cov_1.638298_g149132_i0 PRJNA1112809 152407 261 1.638298 4.27595778 Parmales sp. scaly parma 2962637 SAR_Eukaryotes SAR_Eukaryotes 95.5 1.09e-20   NR GMI50102.1 2962637 g149132 i0 75 0.735632183908046 64 14 73.6 1 3 194 379 440 GMI50102.1 hypothetical protein ScalyP_jg4347 [Parmales sp. scaly parma] diamond 192 95.5 1 Eukaryota Sar     Bolidophyceae Parmales     Parmales sp. scaly parma
8676628 8676628 PRJNA1112809_P_NODE_188027_length_243_cov_0.905882_g184752_i0 PRJNA1112809 188027 243 0.905882 2.20129326 Xanthonema 82368 SAR_Eukaryotes SAR_Eukaryotes 444 3.09e-120   NTclustered gi|2358229|gb|U43277.1|HDU43277 82369 g184752 i0 99.588 100.481481481481 243 1 100 0 1 243 354 112 Heterothrix debilis nuclear 18S ribosomal RNA gene blastn 24417 444 1 Eukaryota Sar     Xanthophyceae Tribonematales Xanthonemataceae Xanthonema Xanthonema debile
11226609 11226609 PRJNA1112809_P_NODE_142789_length_270_cov_5.827411_g139514_i0 PRJNA1112809 142789 270 5.827411 15.7340097 root 1 Root_unresolved Root_unresolved 477 3.4499999999999986e-130   NTclustered gi|345541658|gb|JN547815.1| 5911 g139514 i0 98.519 80.3296296296296 270 4 100 0 1 270 3528 3797 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 21689 477 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12973029 12973029 PRJNA1112809_P_NODE_133071_length_281_cov_1.370192_g129796_i0 PRJNA1112809 133071 281 1.370192 3.85023952 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 176 1.47e-39   NTclustered gi|829188477|ref|XM_001023087.3| 312017 g129796 i0 82.673 26.9679715302491 202 31 71 4 8 207 850 1049 Tetrahymena thermophila SB210 S-adenosyl-L-homocysteine hydrolase partial mRNA blastn 7578 176 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14247915 14247915 PRJNA1112809_P_NODE_123592_length_292_cov_1.406393_g120317_i0 PRJNA1112809 123592 292 1.406393 4.10666756 Chrysolepidomonas dendrolepidota 64707 SAR_Eukaryotes SAR_Eukaryotes 425 1.38e-114   NTclustered gi|16326553|gb|AF409121.1| 64707 g120317 i0 93.151 100.027397260274 292 17 100 2 1 292 3326 3038 Chrysolepidomonas dendrolepidota internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 29208 425 1 Eukaryota Sar     Chrysophyceae Chromulinales Chrysolepidomonadaceae Chrysolepidomonas Chrysolepidomonas dendrolepidota
14248927 14248927 PRJNA1112809_P_NODE_177492_length_246_cov_1.653179_g174217_i0 PRJNA1112809 177492 246 1.653179 4.06682034 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 237 5.72e-58   NTclustered gi|820695469|tpe|LN714488.1| 572307 g174217 i0 84.979 9.07317073170732 233 35 100 0 14 246 96457 96225 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2232 237 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14250681 14250681 PRJNA1112809_P_NODE_92572_length_347_cov_4.594891_g89297_i0 PRJNA1112809 92572 347 4.594891 15.94427177 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 597 3.369999999999999e-166   NTclustered gi|10782|emb|X54004.1| 5908 g89297 i0 97.983 57.7060518731988 347 2 100 1 1 347 3290 2949 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 20024 597 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
21895594 21895594 PRJNA1112809_P_NODE_113678_length_306_cov_3.180258_g110403_i0 PRJNA1112809 113678 306 3.180258 9.73158948 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 206 2.0699999999999997e-48   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g110403 i0 87.363 65.1176470588235 182 19 59 4 2 181 3696 3875 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19926 206 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
21896454 21896454 PRJNA1112809_P_NODE_155878_length_258_cov_1.529730_g152603_i0 PRJNA1112809 155878 258 1.52973 3.9467034 Cryptosporidium hominis 237895 SAR_Eukaryotes SAR_Eukaryotes 460 3.29e-125   NTclustered gi|67586105|ref|XM_660074.1| 353151 g152603 i0 98.842 6.03875968992248 259 1 100 2 1 258 1095 838 Cryptosporidium hominis TU502 sensor histidine kinase (Chro.00003) partial mRNA blastn 1558 460 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
23172066 23172066 PRJNA1112809_P_NODE_163919_length_251_cov_1.224719_g160644_i0 PRJNA1112809 163919 251 1.224719 3.07404469 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 176 1.2899999999999999e-39   NTclustered gi|820695469|tpe|LN714488.1| 572307 g160644 i0 94.017 32.6374501992032 117 5 70 2 76 192 300012 299898 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8192 176 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
24445753 24445753 PRJNA1112809_P_NODE_160500_length_254_cov_1.237569_g157225_i0 PRJNA1112809 160500 254 1.237569 3.14342526 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|915123824|ref|XM_013477722.1| 5804 g157225 i0 100 0.110236220472441 28 0 11 0 161 188 2407 2434 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
27194173 27194173 PRJNA1112809_P_NODE_129642_length_285_cov_1.226415_g126367_i0 PRJNA1112809 129642 285 1.226415 3.49528275 Nannochloropsis gaditana CCMP526 1093141 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.14e-4   NR XP_005856115.1 1093141 g126367 i0 58.7 0.968421052631579 46 18 48.4 1 5 142 98 142 XP_005856115.1 chaperone -domain containing protein [Nannochloropsis gaditana CCMP526] diamond 276 50.1 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis gaditana
27415767 27415767 PRJNA1112809_P_NODE_128363_length_286_cov_1.981221_g125088_i0 PRJNA1112809 128363 286 1.981221 5.66629206 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 64.3 1.65e-9   NR KAK1743974.1 267567 g125088 i0 42.9 0.881118881118881 84 44 85 3 271 29 107 189 KAK1743974.1 hypothetical protein QTG54_005571 [Skeletonema marinoi] diamond 252 64.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
27691233 27691233 PRJNA1112809_P_NODE_201624_length_197_cov_4.701613_g198349_i0 PRJNA1112809 201624 197 4.701613 9.26217761 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 90.5 1.22e-19   NR KAL4470278.1 5901 g198349 i0 70 2.74111675126904 60 18 91.4 0 195 16 87 146 KAL4470278.1 hypothetical protein ABPG74_011889 [Tetrahymena malaccensis] diamond 540 90.9 0.995599559955996 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
28362641 28362641 PRJNA1112809_P_NODE_181146_length_245_cov_0.895349_g177871_i0 PRJNA1112809 181146 245 0.895349 2.19360505 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 94.7 1.97e-20   NR TNV74736.1 5974 g177871 i0 65.2 2.38775510204082 69 24 84.5 0 241 35 1623 1691 TNV74736.1 hypothetical protein FGO68_gene13770 [Halteria grandinella] diamond 585 94.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
28426020 28426020 PRJNA1112809_P_NODE_136706_length_277_cov_1.509804_g133431_i0 PRJNA1112809 136706 277 1.509804 4.18215708 Plasmodium knowlesi strain H 5851 SAR_Eukaryotes SAR_Eukaryotes 65.9 3.96e-10   NR XP_002257651.1 5851 g133431 i0 55.1 4.77617328519856 49 21 53.1 1 275 129 130 177 XP_002257651.1 serine/threonine protein phosphatase 2B catalytic subunit A, putative [Plasmodium knowlesi strain H] diamond 1323 65.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
28795778 28795778 PRJNA1112809_P_NODE_30047_length_830_cov_1.961691_g27023_i0 PRJNA1112809 30047 830 1.961691 16.2820353 root 1 Root_unresolved Root_unresolved 64.7 6.41e-9   NR GLD91986.1 114742 g27023 i0 33.1 1.22530120481928 118 79 42.7 0 395 748 16 133 GLD91986.1 hypothetical protein PINS_up000519 [Pythium insidiosum] diamond 1017 64.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28859003 28859003 PRJNA1112809_P_NODE_175888_length_247_cov_0.885057_g172613_i0 PRJNA1112809 175888 247 0.885057 2.18609079 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.97e-8   NR KAG3012218.1 29920 g172613 i0 84.8 3.60728744939271 33 5 40.1 0 148 246 258 290 KAG3012218.1 hypothetical protein PC119_g12930 [Phytophthora cactorum] diamond 891 58.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
29175034 29175034 PRJNA1112809_P_NODE_126129_length_289_cov_1.296296_g122854_i0 PRJNA1112809 126129 289 1.296296 3.74629544 Naviculaceae 67474 SAR_Eukaryotes SAR_Eukaryotes 105 5.81e-24   NR CAB9501297.1 568900 g122854 i0 55.8 2.95847750865052 95 32 98.6 2 1 285 538 622 CAB9501297.1 Sulfate transporter 4.1, chloroplastic [Seminavis robusta] diamond 855 105 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
29215455 29215455 PRJNA1112809_P_NODE_128589_length_286_cov_1.446009_g125314_i0 PRJNA1112809 128589 286 1.446009 4.13558574 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 97.1 8.27e-24   NR CEP02593.1 37360 g125314 i0 57.3 4.35314685314685 82 35 86 0 246 1 11 92 CEP02593.1 hypothetical protein PBRA_002561 [Plasmodiophora brassicae] diamond 1245 97.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29373183 29373183 PRJNA1112809_P_NODE_184109_length_244_cov_0.900585_g180834_i0 PRJNA1112809 184109 244 0.900585 2.1974274 Durusdinium trenchii 1381693 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0198   NR CAK9102919.1 1381693 g180834 i0 39.1 0.786885245901639 64 30 71.3 2 51 224 565 625 CAK9102919.1 unnamed protein product [Durusdinium trenchii] diamond 192 43.5 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Durusdinium Durusdinium trenchii
29435990 29435990 PRJNA1112809_P_NODE_188910_length_242_cov_1.781065_g185635_i0 PRJNA1112809 188910 242 1.781065 4.3101773 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 100 2.36e-22   NR KAJ1438115.1 483371 g185635 i0 53.8 0.991735537190083 80 37 99.2 0 241 2 488 567 KAJ1438115.1 hypothetical protein B484DRAFT_428161 [Ochromonadaceae sp. CCMP2298] diamond 240 100 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
29531088 29531088 PRJNA1112809_P_NODE_186650_length_243_cov_1.011765_g183375_i0 PRJNA1112809 186650 243 1.011765 2.45858895 Triparma strigata 1606541 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0368   NR GMH86879.1 1606541 g183375 i0 35.5 0.938271604938272 76 45 92.6 2 226 2 106 178 GMH86879.1 hypothetical protein TrST_g12258 [Triparma strigata] diamond 228 42.7 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma strigata
29720202 29720202 PRJNA1112809_P_NODE_172450_length_248_cov_0.880000_g169175_i0 PRJNA1112809 172450 248 0.88 2.1824 Cyclostephanos tholiformis 382380 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.59e-18   NR KAL3827268.1 382380 g169175 i0 59.2 1.71774193548387 71 27 83.5 1 41 247 191 261 KAL3827268.1 hypothetical protein ACHAXA_004743 [Cyclostephanos tholiformis] diamond 426 89.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
29846809 29846809 PRJNA1112809_P_NODE_181271_length_245_cov_0.895349_g177996_i0 PRJNA1112809 181271 245 0.895349 2.19360505 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 111 1.14e-29   NR KAJ1394928.1 483371 g177996 i0 70.7 0.918367346938776 75 22 91.8 0 226 2 1 75 KAJ1394928.1 ribosomal protein L34 [Ochromonadaceae sp. CCMP2298] diamond 225 111 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
29846820 29846820 PRJNA1112809_P_NODE_200211_length_226_cov_2.013072_g196936_i0 PRJNA1112809 200211 226 2.013072 4.54954272 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 111 2.14e-26   NR XP_001012955.1 312017 g196936 i0 94.4 0.716814159292035 54 3 71.7 0 226 65 299 352 XP_001012955.1 glycoside hydrolase family 35 protein [Tetrahymena thermophila SB210] diamond 162 111 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31259749 31259749 PRJNA1112809_P_NODE_36815_length_694_cov_2.111111_g33645_i0 PRJNA1112809 36815 694 2.111111 14.65111034 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 48.5 0.0103   NR CAH0364282.1 35677 g33645 i0 39.4 0.959654178674352 94 38 37.2 3 268 11 72 154 CAH0364282.1 unnamed protein product [Pelagomonas calceolata] diamond 666 48.5 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Pelagomonas Pelagomonas calceolata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;