RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1112809", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1112809 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28236211 28236211 PRJNA1112809_P_NODE_178526_length_246_cov_0.890173_g175251_i0 PRJNA1112809 178526 246 0.890173 2.18982558 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 104 1.05e-24   NR MBI3991103.1 2035772 g175251 i0 72 1.90243902439024 75 21 91.5 0 245 21 72 146 MBI3991103.1 GTP 3',8-cyclase MoaA [Candidatus Omnitrophota bacterium] diamond 468 104 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29941699 29941699 PRJNA1112809_P_NODE_22211_length_1097_cov_2.210938_g19531_i0 PRJNA1112809 22211 1097 2.210938 24.25398986 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 185 2.79e-53   NR MBI2093451.1 2035772 g19531 i0 47.2 1.09115770282589 199 94 51.4 2 214 777 8 206 MBI2093451.1 NYN domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1197 185 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;