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contig_metadata

12 rows where bioproject = "PRJNA1112809", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 12 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 12 ✖

bioproject 1

  • PRJNA1112809 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3574179 3574179 PRJNA1112809_P_NODE_88663_length_357_cov_3.820423_g85388_i0 PRJNA1112809 88663 357 3.820423 13.63891011 Methanobacterium 2160 Archaea Archaea 566 9.759999999999997e-157   NTclustered gi|584298061|gb|KF882000.1| 483896 g85388 i0 95.238 145.725490196078 357 17 100 0 1 357 2099 2455 Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence blastn 52024 566 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium kanagiense
4047148 4047148 PRJNA1112809_P_NODE_195404_length_237_cov_5.128049_g192129_i0 PRJNA1112809 195404 237 5.128049 12.15347613 Methanobacterium kanagiense 483896 Archaea Archaea 361 3.1099999999999996e-95   NTclustered gi|584298061|gb|KF882000.1| 483896 g192129 i0 94.093 132.46835443038 237 14 100 0 1 237 1786 1550 Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence blastn 31395 361 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium kanagiense
5323631 5323631 PRJNA1112809_P_NODE_41725_length_624_cov_4.513612_g38511_i0 PRJNA1112809 41725 624 4.513612 28.16493888 Methanobacterium aridiramus 2584467 Archaea Archaea 459 3.12e-124   NTclustered gi|2523005876|gb|CP040735.1| 2584467 g38511 i0 96.403 68.3509615384615 278 10 84 0 347 624 1376296 1376019 Methanobacterium aridiramus strain CWC-01 chromosome, complete genome blastn 42651 459 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium aridiramus
12502201 12502201 PRJNA1112809_P_NODE_17870_length_1331_cov_3.517488_g15494_i0 PRJNA1112809 17870 1331 3.517488 46.81776528 Methanobacterium 2160 Archaea Archaea 1936 0   NTclustered gi|584298061|gb|KF882000.1| 483896 g15494 i0 93.798 152.585274229902 1290 76 97 4 18 1306 1488 202 Methanobacterium kanagiense strain 169 23S ribosomal RNA gene, partial sequence blastn 203091 1940 0.997938144329897 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium kanagiense
12973473 12973473 PRJNA1112809_P_NODE_156651_length_257_cov_1.929348_g153376_i0 PRJNA1112809 156651 257 1.929348 4.95842436 Methanobacterium sp. PtaU1.Bin 2164 Archaea Archaea 168 3.84e-46   NR OPY20153.1 1811675 g153376 i0 98.8 0.992217898832685 85 1 99.2 0 255 1 494 578 OPY20153.1 MAG: cobaltochelatase subunit CobN [Methanobacterium sp. PtaU1.Bin097] diamond 255 168 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. PtaU1.Bin097
16796578 16796578 PRJNA1112809_P_NODE_148494_length_265_cov_1.359375_g145219_i0 PRJNA1112809 148494 265 1.359375 3.60234375 Methanobacterium sp. MZ-A1 1911685 Archaea Archaea 368 2.12e-97   NTclustered gi|1297871367|gb|CP017767.1| 1911685 g145219 i0 92.015 1.99622641509434 263 19 99 2 4 265 2293687 2293426 Methanobacterium sp. MZ-A1 chromosome, complete genome blastn 529 368 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. MZ-A1
21897041 21897041 PRJNA1112809_P_NODE_191918_length_241_cov_1.761905_g188643_i0 PRJNA1112809 191918 241 1.761905 4.24619105 Methanobacterium 2160 Archaea Archaea 139 1e-36   NR HEX7467179.1 2164 g188643 i0 93.8 2.9253112033195 80 5 99.6 0 241 2 12 91 HEX7467179.1 MFS transporter [Methanobacterium sp.] diamond 705 140 0.992857142857143 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
27596293 27596293 PRJNA1112809_P_NODE_67964_length_429_cov_2.342697_g64690_i0 PRJNA1112809 67964 429 2.342697 10.05017013 root 1 Root_unresolved Root_unresolved 60.5 1.92e-7   NR MEN6553436.1 2164 g64690 i0 58.1 0.594405594405594 43 18 30.1 0 417 289 907 949 MEN6553436.1 AAA family ATPase [Methanobacterium sp.] diamond 255 60.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
29341685 29341685 PRJNA1112809_P_NODE_196789_length_234_cov_2.496894_g193514_i0 PRJNA1112809 196789 234 2.496894 5.84273196 Methanobacteriaceae archaeon 2099680 Archaea Archaea 161 3.789999999999999e-48   NR NYB26408.1 2099680 g193514 i0 100 0.987179487179487 77 0 98.7 0 3 233 87 163 NYB26408.1 metallophosphoesterase family protein [Methanobacteriaceae archaeon] diamond 231 161 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
31458540 31458540 PRJNA1112809_P_NODE_181156_length_245_cov_0.895349_g177881_i0 PRJNA1112809 181156 245 0.895349 2.19360505 Methanobacteriaceae archaeon 2099680 Archaea Archaea 157 3.72e-43   NR NYB27069.1 2099680 g177881 i0 97.5 0.991836734693878 81 2 99.2 0 1 243 480 560 NYB27069.1 DUF128 domain-containing protein [Methanobacteriaceae archaeon] diamond 243 157 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
31521786 31521786 PRJNA1112809_P_NODE_182116_length_245_cov_0.895349_g178841_i0 PRJNA1112809 182116 245 0.895349 2.19360505 Methanobrevibacter sp. 66852 Archaea Archaea 118 1.1000000000000002e-28   NR MBO7691940.1 66852 g178841 i0 66.7 1.98367346938776 81 27 99.2 0 3 245 384 464 MBO7691940.1 DNA polymerase III subunit alpha [Methanobrevibacter sp.] diamond 486 118 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32565934 32565934 PRJNA1112809_P_NODE_181139_length_245_cov_0.895349_g177864_i0 PRJNA1112809 181139 245 0.895349 2.19360505 Methanobacteriaceae archaeon 2099680 Archaea Archaea 162 4.74e-49   NR NYB25710.1 2099680 g177864 i0 98.8 0.991836734693878 81 1 99.2 0 3 245 22 102 NYB25710.1 TetR/AcrR family transcriptional regulator [Methanobacteriaceae archaeon] diamond 243 162 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;