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contig_metadata

23 rows where bioproject = "PRJNA1112809" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA1112809 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2770054 2770054 PRJNA1112809_P_NODE_147943_length_265_cov_2.494792_g144668_i0 PRJNA1112809 147943 265 2.494792 6.6111988 Acytostelium leptosomum 133408 Evosea other_Eukaryota 390 4.519999999999999e-104   NTclustered gi|1057487862|gb|KX539491.1| 133408 g144668 i0 92.989 1.42264150943396 271 13 100 1 1 265 691 961 Acytostelium leptosomum strain FG12A dihydrolipoamide acetyltransferase (pdhC) gene, complete cds blastn 377 390 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
4048632 4048632 PRJNA1112809_P_NODE_92204_length_348_cov_2.745455_g88929_i0 PRJNA1112809 92204 348 2.745455 9.5541834 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 254 8.42e-63   NTclustered gi|909719647|gb|KT185627.1| 5778 g88929 i0 80.851 2.20977011494253 329 57 94 5 21 347 25288 25612 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 769 254 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
6599643 6599643 PRJNA1112809_P_NODE_82146_length_376_cov_1.669967_g78871_i0 PRJNA1112809 82146 376 1.669967 6.27907592 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 422 2.37e-113   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g78871 i0 87.903 55.1595744680851 372 27 99 12 6 376 1243 889 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 20740 422 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
7871834 7871834 PRJNA1112809_P_NODE_124407_length_291_cov_1.389908_g121132_i0 PRJNA1112809 124407 291 1.389908 4.04463228 Acytostelium leptosomum 133408 Evosea other_Eukaryota 527 3.67e-145   NTclustered gi|1057487862|gb|KX539491.1| 133408 g121132 i0 99.313 91.1821305841924 291 2 100 0 1 291 495 205 Acytostelium leptosomum strain FG12A dihydrolipoamide acetyltransferase (pdhC) gene, complete cds blastn 26534 527 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
11698144 11698144 PRJNA1112809_P_NODE_145370_length_268_cov_1.528205_g142095_i0 PRJNA1112809 145370 268 1.528205 4.0955894 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 226 1.37e-54   NTclustered gi|909719647|gb|KT185627.1| 5778 g142095 i0 81.955 0.992537313432836 266 48 99 0 3 268 7433 7698 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 266 226 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
11698173 11698173 PRJNA1112809_P_NODE_146670_length_267_cov_1.164948_g143395_i0 PRJNA1112809 146670 267 1.164948 3.11041116 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 144 1.07e-38   NR YP_003540849.1 5778 g143395 i0 97.3 1.68539325842697 75 2 84.3 0 42 266 314 388 YP_003540849.1 cytochrome c oxidase subunit 2 [Vermamoeba vermiformis] diamond 450 144 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
13776384 13776384 PRJNA1112809_P_NODE_111411_length_310_cov_1.869198_g108136_i0 PRJNA1112809 111411 310 1.869198 5.7945138 Vermamoeba 1260114 Tubulinea other_Eukaryota 568 2.3299999999999995e-157   NTclustered gi|909719645|gb|KT185625.1| 5778 g108136 i0 99.677 98.1612903225806 310 1 100 0 1 310 5615 5306 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 30430 568 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
16797460 16797460 PRJNA1112809_P_NODE_201154_length_206_cov_4.030075_g197879_i0 PRJNA1112809 201154 206 4.030075 8.3019545 Acytostelium leptosomum 133408 Evosea other_Eukaryota 326 9.61e-85   NTclustered gi|1057487862|gb|KX539491.1| 133408 g197879 i0 95.146 95.3349514563107 206 10 100 0 1 206 1120 915 Acytostelium leptosomum strain FG12A dihydrolipoamide acetyltransferase (pdhC) gene, complete cds blastn 19639 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
21425703 21425703 PRJNA1112809_P_NODE_93977_length_344_cov_2.191882_g90702_i0 PRJNA1112809 93977 344 2.191882 7.54007408 Vermamoeba 1260114 Tubulinea other_Eukaryota 614 3.309999999999999e-171   NTclustered gi|909719645|gb|KT185625.1| 5778 g90702 i0 98.837 40.9302325581395 344 4 100 0 1 344 5343 5000 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 14080 614 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
21897687 21897687 PRJNA1112809_P_NODE_45618_length_581_cov_90.838583_g42377_i0 PRJNA1112809 45618 581 90.838583 527.77216723 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 584 4.579999999999998e-162   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g42377 i0 85.025 64.3373493975904 601 61 100 23 1 581 15 606 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 37380 584 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
27627908 27627908 PRJNA1112809_P_NODE_73384_length_406_cov_2.447447_g70109_i0 PRJNA1112809 73384 406 2.447447 9.93663482 root 1 Root_unresolved Root_unresolved 75.5 1.08e-13   NR XP_004338118.1 1257118 g70109 i0 45.9 1.85467980295567 61 33 45.1 0 4 186 40 100 XP_004338118.1 membraneassociated ring finger (C3HC4) 2, putative, partial [Acanthamoeba castellanii str. Neff] diamond 753 75.9 0.994729907773386 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27952366 27952366 PRJNA1112809_P_NODE_193105_length_241_cov_0.916667_g189830_i0 PRJNA1112809 193105 241 0.916667 2.20916747 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 77 3.12e-14   NR PRP84780.1 1890364 g189830 i0 54.5 0.684647302904564 55 25 68.5 0 222 58 589 643 PRP84780.1 hypothetical protein PROFUN_07434 [Planoprotostelium fungivorum] diamond 165 77 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28836363 28836363 PRJNA1112809_P_NODE_98128_length_335_cov_1.511450_g94853_i0 PRJNA1112809 98128 335 1.51145 5.0633575 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 1.51e-11   NR XP_004337874.1 1257118 g94853 i0 42.9 0.814925373134328 91 49 80.6 2 333 64 7 95 XP_004337874.1 uncharacterized protein ACA1_187480 [Acanthamoeba castellanii str. Neff] diamond 273 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29183897 29183897 PRJNA1112809_P_NODE_194069_length_241_cov_0.916667_g190794_i0 PRJNA1112809 194069 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.2 6.17e-17   NR XP_004338074.1 1257118 g190794 i0 68.6 2.39004149377593 70 22 87.1 0 239 30 165 234 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 576 83.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29309958 29309958 PRJNA1112809_P_NODE_189389_length_242_cov_1.319527_g186114_i0 PRJNA1112809 189389 242 1.319527 3.19325534 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 97.1 2.2400000000000003e-21   NR YP_003540849.1 5778 g186114 i0 66.2 0.954545454545455 77 26 95.5 0 3 233 108 184 YP_003540849.1 cytochrome c oxidase subunit 2 [Vermamoeba vermiformis] diamond 231 97.1 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
29341688 29341688 PRJNA1112809_P_NODE_198349_length_230_cov_2.649682_g195074_i0 PRJNA1112809 198349 230 2.649682 6.0942686 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 129 4.33e-35   NR AKT93937.1 5778 g195074 i0 77.6 0.991304347826087 76 17 99.1 0 2 229 40 115 AKT93937.1 ribosomal protein L2 [Vermamoeba vermiformis] diamond 228 129 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
29531046 29531046 PRJNA1112809_P_NODE_139030_length_275_cov_0.792079_g135755_i0 PRJNA1112809 139030 275 0.792079 2.17821725 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 135 4.56e-35   NR YP_003540846.1 5778 g135755 i0 88.3 0.84 77 9 84 0 3 233 454 530 YP_003540846.1 cytochrome c oxidase subunit 1 [Vermamoeba vermiformis] diamond 231 135 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
29720186 29720186 PRJNA1112809_P_NODE_152150_length_261_cov_2.351064_g148875_i0 PRJNA1112809 152150 261 2.351064 6.13627704 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 150 3.2299999999999998e-43   NR YP_003540842.1 5778 g148875 i0 98.6 0.850574712643678 74 1 85.1 0 259 38 166 239 YP_003540842.1 cytochrome c oxidase subunit 3 [Vermamoeba vermiformis] diamond 222 150 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
30036337 30036337 PRJNA1112809_P_NODE_159191_length_255_cov_1.472527_g155916_i0 PRJNA1112809 159191 255 1.472527 3.75494385 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 130 8.01e-33   NR XP_004356732.1 1257118 g155916 i0 67.9 0.988235294117647 84 27 98.8 0 254 3 323 406 XP_004356732.1 vacuolar proton ATPase, putative [Acanthamoeba castellanii str. Neff] diamond 252 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30162389 30162389 PRJNA1112809_P_NODE_107052_length_317_cov_3.282787_g103777_i0 PRJNA1112809 107052 317 3.282787 10.40643479 Heterostelium pallidum 13642 Evosea other_Eukaryota 61.6 3.94e-9   NR YP_209579.1 13642 g103777 i0 48.5 0.643533123028391 68 29 58.7 1 206 21 5 72 YP_209579.1 ribosomal protein L11 [Heterostelium pallidum] diamond 204 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
30257746 30257746 PRJNA1112809_P_NODE_134172_length_280_cov_1.193237_g130897_i0 PRJNA1112809 134172 280 1.193237 3.3410636 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 111 5.18e-29   NR AKT93932.1 5778 g130897 i0 72.7 1.66071428571429 77 20 82.5 1 279 49 77 152 AKT93932.1 ribosomal protein L11 [Vermamoeba vermiformis] diamond 465 111 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
30763099 30763099 PRJNA1112809_P_NODE_190374_length_242_cov_0.911243_g187099_i0 PRJNA1112809 190374 242 0.911243 2.20520806 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 104 7.94e-24   NR PRP83074.1 1890364 g187099 i0 61.7 1.00413223140496 81 30 99.2 1 241 2 3439 3519 PRP83074.1 putative HECT E3 ubiquitin ligase [Planoprotostelium fungivorum] diamond 243 104 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30984321 30984321 PRJNA1112809_P_NODE_161814_length_252_cov_2.798883_g158539_i0 PRJNA1112809 161814 252 2.798883 7.05318516 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 89.7 1.15e-18   NR AKT93962.1 5778 g158539 i0 56.5 1.01190476190476 85 35 98.8 1 3 251 22 106 AKT93962.1 hypothetical protein AB846_53 [Vermamoeba vermiformis] diamond 255 89.7 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;