contig_metadata
9 rows where bioproject = "PRJNA1111448", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217351 | 217351 | PRJNA1111448_S_NODE_115701_length_255_cov_2.027473_g114878_i0 | PRJNA1111448 | 115701 | 255 | 2.027473 | 5.17005615 | Wufeng shrew picornavirus 2 | 3084773 | Viruses | Viruses | 52.8 | 0.023 | NTclustered | gi|2633074035|gb|OQ716065.1| | 3084773 | g114878 | i0 | 100 | 0.109803921568627 | 28 | 0 | 11 | 0 | 103 | 130 | 9748 | 9721 | MAG: Wufeng shrew picornavirus 2 isolate WF_Ch.smithii_picorna_3 polyprotein gene, complete cds | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Wufeng shrew picornavirus 2 | ||||
| 4044368 | 4044368 | PRJNA1111448_S_NODE_128324_length_247_cov_0.885057_g127501_i0 | PRJNA1111448 | 128324 | 247 | 0.885057 | 2.18609079 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 1.71e-8 | NTclustered | gi|2557639027|emb|OY695365.1| | 2697049 | g127501 | i0 | 97.674 | 16.2388663967611 | 43 | 0 | 17 | 1 | 2 | 44 | 19286 | 19245 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4011 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5320401 | 5320401 | PRJNA1111448_S_NODE_133085_length_244_cov_1.222222_g132262_i0 | PRJNA1111448 | 133085 | 244 | 1.222222 | 2.98222168 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 82.4 | 2.81e-11 | NTclustered | gi|2557415206|emb|OY652159.1| | 2697049 | g132262 | i0 | 90.625 | 21.9180327868852 | 64 | 3 | 25 | 3 | 177 | 238 | 7114 | 7176 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 5348 | 82.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 9145719 | 9145719 | PRJNA1111448_S_NODE_4828_length_747_cov_2.074184_g4189_i0 | PRJNA1111448 | 4828 | 747 | 2.074184 | 15.49415448 | Dolerus tritici iflavirus 1 | 3350209 | Viruses | Viruses | 56.5 | 0.006 | NTclustered | gi|2833733277|gb|PQ323359.2| | 3350209 | g4189 | i0 | 100 | 0.0789825970548862 | 30 | 0 | 4 | 0 | 718 | 747 | 85 | 56 | Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds | blastn | 59 | 56.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Dolerus tritici iflavirus 1 | ||
| 11696232 | 11696232 | PRJNA1111448_S_NODE_124810_length_249_cov_0.801136_g123987_i0 | PRJNA1111448 | 124810 | 249 | 0.801136 | 1.99482864 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 97.1 | 1.03e-15 | NTclustered | gi|2165836885|emb|OV197189.1| | 2697049 | g123987 | i0 | 93.846 | 23.6987951807229 | 65 | 2 | 26 | 2 | 3 | 67 | 29973 | 29911 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5901 | 97.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 16795613 | 16795613 | PRJNA1111448_S_NODE_96314_length_276_cov_1.098522_g95491_i0 | PRJNA1111448 | 96314 | 276 | 1.098522 | 3.03192072 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 93.5 | 1.5e-14 | NTclustered | gi|2165836885|emb|OV197189.1| | 2697049 | g95491 | i0 | 95 | 19.6521739130435 | 60 | 1 | 22 | 2 | 1 | 60 | 29968 | 29911 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 5424 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 20619237 | 20619237 | PRJNA1111448_S_NODE_59337_length_329_cov_1.152344_g58514_i0 | PRJNA1111448 | 59337 | 329 | 1.152344 | 3.79121176 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 73.1 | 2.38e-8 | NTclustered | gi|2557399578|emb|OY642376.1| | 2697049 | g58514 | i0 | 92.308 | 13.3434650455927 | 52 | 2 | 16 | 2 | 1 | 52 | 19297 | 19248 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 4390 | 73.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 30384190 | 30384190 | PRJNA1111448_S_NODE_23353_length_444_cov_1.940701_g22531_i0 | PRJNA1111448 | 23353 | 444 | 1.940701 | 8.61671244 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 59.7 | 4.04e-7 | NR | UNY42093.1 | 3003959 | g22531 | i0 | 66.7 | 0.263513513513513 | 39 | 13 | 26.4 | 0 | 327 | 443 | 25 | 63 | UNY42093.1 MAG: polyprotein 1 [Picornavirales sp.] | diamond | 117 | 59.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 32691427 | 32691427 | PRJNA1111448_S_NODE_73040_length_306_cov_0.991416_g72217_i0 | PRJNA1111448 | 73040 | 306 | 0.991416 | 3.03373296 | Picornaviridae sp. | 1530251 | Viruses | Viruses | 180 | 2.05e-51 | NR | URG14993.1 | 1530251 | g72217 | i0 | 78.4 | 1 | 102 | 22 | 100 | 0 | 1 | 306 | 34 | 135 | URG14993.1 MAG: RNA dependent RNA polymerase, partial [Picornaviridae sp.] | diamond | 306 | 180 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Picornaviridae sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;