RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111448" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111448 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27225701 27225701 PRJNA1111448_S_NODE_78243_length_298_cov_2.053333_g77420_i0 PRJNA1111448 78243 298 2.053333 6.11893234 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 43.1 0.0462   NR KAJ7377087.1 174260 g77420 i0 28 0.936241610738255 93 59 88.6 2 296 33 177 266 KAJ7377087.1 hypothetical protein OS493_030681 [Desmophyllum pertusum] diamond 279 43.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
28109987 28109987 PRJNA1111448_S_NODE_56045_length_335_cov_1.816794_g55222_i0 PRJNA1111448 56045 335 1.816794 6.0862599 Montipora capricornis 246305 Cnidaria other_Eukaryota 45.4 0.0118   NR XP_068742111.1 246305 g55222 i0 30.7 1.81791044776119 101 33 57.3 1 139 330 30 130 XP_068742111.1 uncharacterized protein [Montipora capricornis] diamond 609 45.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;