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contig_metadata

22 rows where bioproject = "PRJNA1111448" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA1111448 · 22 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1492131 1492131 PRJNA1111448_S_NODE_12482_length_545_cov_2.379237_g11682_i0 PRJNA1111448 12482 545 2.379237 12.96684165 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 752 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g11682 i0 91.621 75.6036697247706 549 39 100 5 1 545 583 38 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 41204 752 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
2298026 2298026 PRJNA1111448_S_NODE_142562_length_229_cov_3.032051_g141739_i0 PRJNA1111448 142562 229 3.032051 6.94339679 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 424 3.76e-114   NTclustered gi|363412153|gb|JN120227.1| 60850 g141739 i0 100 100 229 0 100 0 1 229 1480 1252 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 22900 424 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
2298048 2298048 PRJNA1111448_S_NODE_16402_length_497_cov_18.224057_g15587_i0 PRJNA1111448 16402 497 18.224057 90.57356329 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 913 0   NTclustered gi|10662|emb|X56170.1| 5894 g15587 i0 99.799 99.215291750503 497 1 100 0 1 497 575 79 T.canadensis gene for small subunit ribosomal RNA (16S like rRNA) blastn 49310 918 0.994553376906318 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena canadensis
2298379 2298379 PRJNA1111448_S_NODE_80162_length_295_cov_7.049550_g79339_i0 PRJNA1111448 80162 295 7.04955 20.7961725 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 545 1.03e-150   NTclustered gi|1621572405|gb|MH051920.1| 5893 g79339 i0 100 99.9830508474576 295 0 100 0 1 295 1506 1212 Tetrahymena borealis strain 1630/5A small subunit ribosomal RNA gene, partial sequence blastn 29495 545 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena borealis
2767989 2767989 PRJNA1111448_S_NODE_114403_length_256_cov_17.628415_g113580_i0 PRJNA1111448 114403 256 17.628415 45.1287424 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 446 9.139999999999999e-121   NTclustered gi|10782|emb|X54004.1| 5908 g113580 i0 98.047 59.6796875 256 5 100 0 1 256 2182 1927 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15278 446 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
2768562 2768562 PRJNA1111448_S_NODE_40023_length_374_cov_1.717608_g39200_i0 PRJNA1111448 40023 374 1.717608 6.42385392 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 614 3.619999999999999e-171   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g39200 i0 96.267 92.8983957219251 375 13 100 1 1 374 1838 1464 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 34744 614 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
4850882 4850882 PRJNA1111448_S_NODE_63024_length_322_cov_1.855422_g62201_i0 PRJNA1111448 63024 322 1.855422 5.97445884 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 525 1.4799999999999995e-144   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g62201 i0 96.25 38.6521739130435 320 12 99 0 1 320 329 10 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12446 525 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
7870116 7870116 PRJNA1111448_S_NODE_10907_length_570_cov_2.356137_g10120_i0 PRJNA1111448 10907 570 2.356137 13.4299809 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 1018 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g10120 i0 99.117 78.3087719298246 566 5 99 0 5 570 18 583 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 44636 1018 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
7870886 7870886 PRJNA1111448_S_NODE_50747_length_346_cov_2.263736_g49924_i0 PRJNA1111448 50747 346 2.263736 7.83252656 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 592 1.5599999999999996e-164   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g49924 i0 97.674 79.1156069364162 344 8 99 0 3 346 1982 2325 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 27374 592 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
8675962 8675962 PRJNA1111448_S_NODE_30947_length_405_cov_19.400602_g30124_i0 PRJNA1111448 30947 405 19.400602 78.5724381 root 1 Root_unresolved Root_unresolved 726 0   NTclustered gi|345541658|gb|JN547815.1| 5911 g30124 i0 99.012 84.6123456790123 405 4 100 0 1 405 3402 3806 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 34268 726 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
9145445 9145445 PRJNA1111448_S_NODE_21368_length_457_cov_2.018229_g20546_i0 PRJNA1111448 21368 457 2.018229 9.22330653 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 717 0   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g20546 i0 94.989 71.2844638949672 459 19 100 2 1 457 2083 1627 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 32577 717 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
9145886 9145886 PRJNA1111448_S_NODE_65228_length_318_cov_2.542857_g64405_i0 PRJNA1111448 65228 318 2.542857 8.08628526 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 556 5.18e-154   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g64405 i0 100 92.6603773584906 301 0 95 0 18 318 561 861 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 29466 556 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
9950823 9950823 PRJNA1111448_S_NODE_24768_length_435_cov_6.500000_g23945_i0 PRJNA1111448 24768 435 6.5 28.275 root 1 Root_unresolved Root_unresolved 761 0   NTclustered gi|10782|emb|X54004.1| 5908 g23945 i0 98.174 86.5310344827586 438 5 100 3 1 435 1943 1506 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 37641 761 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
13776058 13776058 PRJNA1111448_S_NODE_47551_length_353_cov_22.910714_g46728_i0 PRJNA1111448 47551 353 22.910714 80.87482042 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 647 0   NTclustered gi|1172880852|gb|KY864168.1| 5909 g46728 i0 99.717 99.9773371104816 353 1 100 0 1 353 596 948 Tetrahymena rostrata isolate TR small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35292 652 0.992331288343558 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
14246331 14246331 PRJNA1111448_S_NODE_117012_length_254_cov_1.475138_g116189_i0 PRJNA1111448 117012 254 1.475138 3.74685052 Plagiopyla sp. QZ-2012 1143721 SAR_Eukaryotes SAR_Eukaryotes 425 1.18e-114   NTclustered gi|375305427|gb|JF975387.1| 1143721 g116189 i0 97.244 87.8346456692913 254 2 100 3 1 254 617 865 Plagiopyla sp. QZ-2012 28S ribosomal RNA gene, partial sequence blastn 22310 425 1 Eukaryota Sar   Ciliophora Plagiopylea Plagiopylida Plagiopylidae Plagiopyla Plagiopyla sp. QZ-2012
14246610 14246610 PRJNA1111448_S_NODE_141352_length_234_cov_2.391304_g140529_i0 PRJNA1111448 141352 234 2.391304 5.59565136 uncultured Chilodonella 1284377 SAR_Eukaryotes SAR_Eukaryotes 368 1.8299999999999999e-97   NTclustered gi|1354561575|gb|MH022944.1| 1284377 g140529 i0 94.915 77.6752136752137 236 10 100 2 1 234 62 297 Uncultured Chilodonella clone OTU163 small subunit ribosomal RNA gene, partial sequence blastn 18176 368 1 Eukaryota Sar   Ciliophora Phyllopharyngea       uncultured Chilodonella
15520075 15520075 PRJNA1111448_S_NODE_11753_length_556_cov_17.598344_g10962_i0 PRJNA1111448 11753 556 17.598344 97.84679264 Tetrahymena sp. KGE15 1200497 SAR_Eukaryotes SAR_Eukaryotes 1002 0   NTclustered gi|523704203|emb|HE861887.1| 1200497 g10962 i0 99.457 71.5467625899281 552 2 99 1 1 551 552 1 Tetrahymena sp. KGE15 partial 28S rRNA gene, strain KGE15 blastn 39780 1002 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. KGE15
18069252 18069252 PRJNA1111448_S_NODE_136095_length_242_cov_2.248521_g135272_i0 PRJNA1111448 136095 242 2.248521 5.44142082 Tetrahymena acanthophora 2704174 SAR_Eukaryotes SAR_Eukaryotes 431 2.4e-116   NTclustered gi|2082965250|gb|MZ827090.1| 2704174 g135272 i0 98.76 99.198347107438 242 3 100 0 1 242 750 509 Tetrahymena acanthophora isolate NB176 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24006 431 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena acanthophora
18069438 18069438 PRJNA1111448_S_NODE_27255_length_422_cov_2.401146_g26432_i0 PRJNA1111448 27255 422 2.401146 10.13283612 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 682 0   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g26432 i0 99.731 82.8838862559242 372 1 88 0 51 422 1843 1472 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 34977 682 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
18069534 18069534 PRJNA1111448_S_NODE_36655_length_384_cov_8.909968_g35832_i0 PRJNA1111448 36655 384 8.909968 34.21427712 Colpoda sp. 2-SMaurya-2022 3384729 SAR_Eukaryotes SAR_Eukaryotes 688 0   NTclustered gi|2178724620|gb|OM278536.1| 3384729 g35832 i0 98.958 98.6927083333333 384 4 100 0 1 384 551 934 Colpoda sp. 2-SMaurya-2022 strain J21 small subunit ribosomal RNA gene, partial sequence blastn 37898 688 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp. 2-SMaurya-2022
20618885 20618885 PRJNA1111448_S_NODE_19277_length_472_cov_3.197995_g18456_i0 PRJNA1111448 19277 472 3.197995 15.0945364 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 723 0   NTclustered gi|2651357788|gb|PP174303.1| 41631 g18456 i0 94.48 67.3283898305085 471 22 99 4 4 472 3980 3512 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31779 723 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
22699404 22699404 PRJNA1111448_S_NODE_116518_length_254_cov_5.558011_g115695_i0 PRJNA1111448 116518 254 5.558011 14.11734794 Colpodida 88566 SAR_Eukaryotes SAR_Eukaryotes 459 1.1599999999999999e-124   NTclustered gi|329754432|gb|HM140394.1| 459237 g115695 i0 99.213 99.4094488188976 254 2 100 0 1 254 132 385 Bresslauides discoideus isolate KR-09091401 small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 25250 459 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Hausmanniellidae Bresslauides Bresslauides discoideus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;