contig_metadata
7 rows where bioproject = "PRJNA1111448" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2768465 | 2768465 | PRJNA1111448_S_NODE_30863_length_406_cov_1.783784_g30040_i0 | PRJNA1111448 | 30863 | 406 | 1.783784 | 7.24216304 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 483 | 1.17e-131 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g30040 | i0 | 88.177 | 186.059113300493 | 406 | 47 | 100 | 1 | 1 | 406 | 1293767 | 1294171 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 75540 | 483 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 13776305 | 13776305 | PRJNA1111448_S_NODE_92791_length_280_cov_1.115942_g91968_i0 | PRJNA1111448 | 92791 | 280 | 1.115942 | 3.1246376 | Peredibacter | 263370 | Bacteria | Bacteria | 512 | 9.85e-141 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g91968 | i0 | 99.643 | 245.514285714286 | 280 | 1 | 100 | 0 | 1 | 280 | 511539 | 511260 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 68744 | 512 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 14246875 | 14246875 | PRJNA1111448_S_NODE_42132_length_368_cov_1.271186_g41309_i0 | PRJNA1111448 | 42132 | 368 | 1.271186 | 4.67796448 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 497 | 3.74e-136 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g41309 | i0 | 91.899 | 161.372282608696 | 358 | 26 | 97 | 2 | 1 | 356 | 511832 | 512188 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 59385 | 497 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 18069205 | 18069205 | PRJNA1111448_S_NODE_132075_length_245_cov_0.895349_g131252_i0 | PRJNA1111448 | 132075 | 245 | 0.895349 | 2.19360505 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 442 | 1.1199999999999994e-119 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g131252 | i0 | 99.587 | 40.8775510204082 | 242 | 1 | 99 | 0 | 4 | 245 | 1292678 | 1292437 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 10015 | 442 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 25249391 | 25249391 | PRJNA1111448_S_NODE_98300_length_273_cov_2.380000_g97477_i0 | PRJNA1111448 | 98300 | 273 | 2.38 | 6.4974 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 496 | 9.63e-136 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g97477 | i0 | 99.631 | 178.26739926739901 | 271 | 1 | 99 | 0 | 1 | 271 | 956 | 686 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 48667 | 496 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 31331720 | 31331720 | PRJNA1111448_S_NODE_131836_length_245_cov_0.895349_g131013_i0 | PRJNA1111448 | 131836 | 245 | 0.895349 | 2.19360505 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 126 | 1.0799999999999999e-32 | NR | MFP5459138.1 | 3058048 | g131013 | i0 | 82.4 | 1.82448979591837 | 74 | 13 | 90.6 | 0 | 224 | 3 | 218 | 291 | MFP5459138.1 molecular chaperone DnaJ [Bacteriovoracia bacterium] | diamond | 447 | 126 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 31458452 | 31458452 | PRJNA1111448_S_NODE_107056_length_264_cov_1.209424_g106233_i0 | PRJNA1111448 | 107056 | 264 | 1.209424 | 3.19287936 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 115 | 1.59e-28 | NR | NUN06814.1 | 28201 | g106233 | i0 | 61.6 | 0.977272727272727 | 86 | 33 | 97.7 | 0 | 263 | 6 | 42 | 127 | NUN06814.1 hypothetical protein [Bdellovibrio sp.] | diamond | 258 | 115 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;