RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111448" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA1111448 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31458460 31458460 PRJNA1111448_S_NODE_92876_length_280_cov_1.115942_g92053_i0 PRJNA1111448 92876 280 1.115942 3.1246376 Thermococcus chitonophagus 54262 Archaea Archaea 43.1 0.0419   NR WP_157092415.1 54262 g92053 i0 38 0.535714285714286 50 27 49.3 1 81 218 368 417 WP_157092415.1 hypothetical protein [Thermococcus chitonophagus] diamond 150 43.1 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus chitonophagus
32597189 32597189 PRJNA1111448_S_NODE_134000_length_244_cov_0.842105_g133177_i0 PRJNA1111448 134000 244 0.842105 2.0547362 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 43.1 0.0138   NR MDP6099092.1 2670411 g133177 i0 38.3 0.577868852459016 47 23 57.8 1 28 168 9 49 MDP6099092.1 hypothetical protein [Candidatus Thalassarchaeaceae archaeon] diamond 141 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;