RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1111448", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1111448 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1492232 1492232 PRJNA1111448_S_NODE_133782_length_244_cov_0.900585_g132959_i0 PRJNA1111448 133782 244 0.900585 2.1974274 Fungi 4751 Fungi Fungi 107 3.88e-28   NR PVU85474.1 61424 g132959 i0 80.3 26.25 61 12 75 0 3 185 47 107 PVU85474.1 hypothetical protein BB559_007000 [Furculomyces boomerangus] diamond 6405 107 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Furculomyces Furculomyces boomerangus
1492276 1492276 PRJNA1111448_S_NODE_137222_length_242_cov_0.911243_g136399_i0 PRJNA1111448 137222 242 0.911243 2.20520806 Linderina pennispora 61395 Fungi Fungi 119 2.12e-22   NTclustered gi|2028318212|ref|XM_040887184.1| 61395 g136399 i0 93.671 3.59090909090909 79 5 33 0 89 167 940 1018 Linderina pennispora ribosomal protein L18e (DL89DRAFT_266692), mRNA blastn 869 119 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
12972114 12972114 PRJNA1111448_S_NODE_72791_length_306_cov_1.652361_g71968_i0 PRJNA1111448 72791 306 1.652361 5.05622466 Linderina pennispora 61395 Fungi Fungi 111 4.64e-20   NTclustered gi|2028323302|ref|XM_040891225.1| 61395 g71968 i0 77.251 20.5555555555556 211 35 66 11 102 304 1020 815 Linderina pennispora WD40 repeat-like protein (DL89DRAFT_32066), mRNA blastn 6290 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
28480251 28480251 PRJNA1111448_S_NODE_132506_length_244_cov_1.801170_g131683_i0 PRJNA1111448 132506 244 1.80117 4.3948548 Fungi 4751 Fungi Fungi 71.2 3.29e-12   NR KAI8873600.1 304332 g131683 i0 47.6 2.01639344262295 82 41 98.4 1 3 242 423 504 KAI8873600.1 acyltransferase ChoActase/COT/CPT, partial [Ramicandelaber brevisporus] diamond 492 71.6 0.994413407821229 Eukaryota Opisthokonta Fungi Zoopagomycota   Ramicandelaberales Ramicandelaberaceae Ramicandelaber Ramicandelaber brevisporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;