contig_metadata
11 rows where bioproject = "PRJNA1111448", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6596212 | 6596212 | PRJNA1111448_S_NODE_55986_length_335_cov_2.114504_g55163_i0 | PRJNA1111448 | 55986 | 335 | 2.114504 | 7.0835884 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 272 | 2.2299999999999997e-68 | NTclustered | gi|325194347|emb|FR825188.1| | 890382 | g55163 | i0 | 83 | 71.3014925373134 | 300 | 51 | 90 | 0 | 1 | 300 | 978 | 1277 | Albugo laibachii Nc14, genomic contig CONTIG_1829_NC14_v4_1468_6528 | blastn | 23886 | 272 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 8676202 | 8676202 | PRJNA1111448_S_NODE_72327_length_307_cov_1.243590_g71504_i0 | PRJNA1111448 | 72327 | 307 | 1.24359 | 3.8178213 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 531 | 3.0199999999999998e-146 | NTclustered | gi|50261276|ref|NC_005984.1| | 4770 | g71504 | i0 | 97.735 | 106.260586319218 | 309 | 5 | 100 | 2 | 1 | 307 | 9177 | 9485 | Saprolegnia ferax mitochondrion, complete genome | blastn | 32622 | 531 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia ferax | ||
| 13776325 | 13776325 | PRJNA1111448_S_NODE_96791_length_275_cov_1.618812_g95968_i0 | PRJNA1111448 | 96791 | 275 | 1.618812 | 4.451733 | Albugo | 65356 | SAR_Eukaryotes | SAR_Eukaryotes | 127 | 1.03e-32 | NR | CCI42781.1 | 65357 | g95968 | i0 | 69.4 | 4.63636363636364 | 85 | 26 | 92.7 | 0 | 273 | 19 | 330 | 414 | CCI42781.1 unnamed protein product [Albugo candida] | diamond | 1275 | 127 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 15050267 | 15050267 | PRJNA1111448_S_NODE_144412_length_200_cov_4.850394_g143589_i0 | PRJNA1111448 | 144412 | 200 | 4.850394 | 9.700788 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 359 | 9.14e-95 | NTclustered | gi|166051677|emb|CU353805.1| | 100861 | g143589 | i0 | 99 | 94.985 | 200 | 2 | 100 | 0 | 1 | 200 | 85 | 284 | Aphanomyces euteiches cDNA | blastn | 18997 | 359 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 18069411 | 18069411 | PRJNA1111448_S_NODE_23755_length_441_cov_5.437500_g22933_i0 | PRJNA1111448 | 23755 | 441 | 5.4375 | 23.979375 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 809 | 0 | NTclustered | gi|698793876|ref|XR_717098.1| | 112090 | g22933 | i0 | 99.773 | 101.24716553288 | 441 | 1 | 100 | 0 | 1 | 441 | 2124 | 2564 | Aphanomyces astaci 28S ribosomal RNA rRNA | blastn | 44650 | 809 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 21894818 | 21894818 | PRJNA1111448_S_NODE_51118_length_345_cov_2.830882_g50295_i0 | PRJNA1111448 | 51118 | 345 | 2.830882 | 9.7665429 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 126 | 1.96e-33 | NR | OQS05478.1 | 74557 | g50295 | i0 | 61.5 | 6.99130434782609 | 109 | 41 | 94.8 | 1 | 345 | 19 | 125 | 232 | OQS05478.1 40S ribosomal protein S3-3 [Thraustotheca clavata] | diamond | 2412 | 126 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 21895147 | 21895147 | PRJNA1111448_S_NODE_83158_length_291_cov_13.646789_g82335_i0 | PRJNA1111448 | 83158 | 291 | 13.646789 | 39.71215599 | Geolegnia helicoides | 1432543 | SAR_Eukaryotes | SAR_Eukaryotes | 496 | 1.04e-135 | NTclustered | gi|563440377|gb|KF656776.1| | 1432543 | g82335 | i0 | 97.27 | 100.216494845361 | 293 | 6 | 100 | 1 | 1 | 291 | 905 | 613 | Geolegnia helicoides internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence | blastn | 29163 | 496 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Geolegnia | Geolegnia helicoides | ||
| 23975012 | 23975012 | PRJNA1111448_S_NODE_33039_length_397_cov_26.990741_g32216_i0 | PRJNA1111448 | 33039 | 397 | 26.990741 | 107.15324177 | Verrucalvaceae | 120409 | SAR_Eukaryotes | SAR_Eukaryotes | 701 | 0 | NTclustered | gi|698793877|ref|XR_717099.1| | 112090 | g32216 | i0 | 98.492 | 99.8463476070529 | 398 | 5 | 100 | 1 | 1 | 397 | 598 | 995 | Aphanomyces astaci 18S ribosomal RNA rRNA | blastn | 39639 | 701 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 27564325 | 27564325 | PRJNA1111448_S_NODE_94304_length_278_cov_1.502439_g93481_i0 | PRJNA1111448 | 94304 | 278 | 1.502439 | 4.17678042 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 111 | 3.68e-29 | NR | KAF0694959.1 | 120398 | g93481 | i0 | 100 | 1.23021582733813 | 57 | 0 | 61.5 | 0 | 3 | 173 | 74 | 130 | KAF0694959.1 hypothetical protein As57867_014131 [Aphanomyces stellatus] | diamond | 342 | 111 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 28994474 | 28994474 | PRJNA1111448_S_NODE_81548_length_294_cov_1.045249_g80725_i0 | PRJNA1111448 | 81548 | 294 | 1.045249 | 3.07303206 | Aphanomyces stellatus | 120398 | SAR_Eukaryotes | SAR_Eukaryotes | 165 | 2.01e-50 | NR | KAF0708390.1 | 120398 | g80725 | i0 | 82.5 | 1.97959183673469 | 97 | 17 | 99 | 0 | 293 | 3 | 40 | 136 | KAF0708390.1 hypothetical protein As57867_006351, partial [Aphanomyces stellatus] | diamond | 582 | 165 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 29531009 | 29531009 | PRJNA1111448_S_NODE_109830_length_261_cov_1.468085_g109007_i0 | PRJNA1111448 | 109830 | 261 | 1.468085 | 3.83170185 | Peronospora belbahrii | 622444 | SAR_Eukaryotes | SAR_Eukaryotes | 121 | 5.54e-32 | NR | CAH0482684.1 | 622444 | g109007 | i0 | 70 | 1.75862068965517 | 80 | 24 | 92 | 0 | 258 | 19 | 140 | 219 | CAH0482684.1 unnamed protein product [Peronospora belbahrii] | diamond | 459 | 121 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Peronospora | Peronospora belbahrii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;