RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111448", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1111448 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24443343 24443343 PRJNA1111448_S_NODE_11040_length_568_cov_1.361616_g10253_i0 PRJNA1111448 11040 568 1.361616 7.7339788799999996 Geodia barretti 519541 Porifera other_Eukaryota 250 1.7199999999999996e-81   NR CAI8032315.1 519541 g10253 i0 67.6 2.92077464788732 185 57 96.1 1 566 21 22 206 CAI8032315.1 40S ribosomal protein S8 [Geodia barretti] diamond 1659 250 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti
32208758 32208758 PRJNA1111448_S_NODE_126898_length_247_cov_1.954023_g126075_i0 PRJNA1111448 126898 247 1.954023 4.82643681 Opisthokonta 33154 Porifera other_Eukaryota 99 4.68e-24   NR XP_065836116.1 121494 g126075 i0 59.8 6.97165991902834 82 33 99.6 0 2 247 78 159 XP_065836116.1 small ribosomal subunit protein eS19-like [Oscarella lobularis] diamond 1722 99 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;