RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1111448", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA1111448 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4044549 4044549 PRJNA1111448_S_NODE_14404_length_520_cov_2.588367_g13597_i0 PRJNA1111448 14404 520 2.588367 13.4595084 Lobulomycetales sp. 2058121 Fungi Fungi 187 1.3399999999999996e-42   NTclustered gi|2468790865|gb|OQ702874.1| 2058121 g13597 i0 80 31.1057692307692 275 38 52 14 5 273 4383 4120 Lobulomycetales sp. isolate PSC090 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16175 187 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
5321009 5321009 PRJNA1111448_S_NODE_64685_length_319_cov_2.109756_g63862_i0 PRJNA1111448 64685 319 2.109756 6.73012164 Opisthokonta 33154 Fungi Fungi 139 1.53e-38   NR KAI8851906.1 64509 g63862 i0 67.7 9.74294670846395 96 31 90.3 0 1 288 165 260 KAI8851906.1 40S ribosomal protein s2 [Chytridium lagenaria] diamond 3108 139 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
13775698 13775698 PRJNA1111448_S_NODE_108271_length_263_cov_1.026316_g107448_i0 PRJNA1111448 108271 263 1.026316 2.69921108 root 1 Root_unresolved Root_unresolved 167 5.929999999999999e-47   NR KAI8855110.1 64509 g107448 i0 93.1 52.5969581749049 87 6 99.2 0 1 261 371 457 KAI8855110.1 carboxyl transferase [Chytridium lagenaria] diamond 13833 168 0.994047619047619 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria
28732881 28732881 PRJNA1111448_S_NODE_61367_length_325_cov_1.698413_g60544_i0 PRJNA1111448 61367 325 1.698413 5.51984225 root 1 Root_unresolved Root_unresolved 114 4.42e-27   NR KAJ3199733.1 109932 g60544 i0 80.6 3.09230769230769 67 13 61.8 0 325 125 533 599 KAJ3199733.1 hypothetical protein HDU82_000197 [Entophlyctis luteolus] diamond 1005 114 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
31774481 31774481 PRJNA1111448_S_NODE_94657_length_278_cov_1.048780_g93834_i0 PRJNA1111448 94657 278 1.04878 2.9156084 Quaeritorhiza haematococci 2654861 Fungi Fungi 102 1.98e-25   NR KAJ3087312.1 2654861 g93834 i0 55.7 0.949640287769784 88 39 95 0 1 264 49 136 KAJ3087312.1 hypothetical protein HK102_011368 [Quaeritorhiza haematococci] diamond 264 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
32903047 32903047 PRJNA1111448_S_NODE_133560_length_244_cov_0.900585_g132737_i0 PRJNA1111448 133560 244 0.900585 2.1974274 Fungi 4751 Fungi Fungi 115 4.65e-28   NR KAJ3093415.1 109957 g132737 i0 66.7 4.89344262295082 78 26 95.9 0 5 238 287 364 KAJ3093415.1 hypothetical protein HK100_006622 [Physocladia obscura] diamond 1194 115 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Physocladia Physocladia obscura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;