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contig_metadata

10 rows where bioproject = "PRJNA1111448", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 10 ✖

tax_clade 1

  • Discoba · 10 ✖

bioproject 1

  • PRJNA1111448 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1492950 1492950 PRJNA1111448_S_NODE_76062_length_301_cov_2.263158_g75239_i0 PRJNA1111448 76062 301 2.263158 6.81210558 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 551 2.2699999999999992e-152   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g75239 i0 99.668 41.7641196013289 301 1 100 0 1 301 3151 3451 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12571 551 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4850792 4850792 PRJNA1111448_S_NODE_44364_length_362_cov_1.065744_g43541_i0 PRJNA1111448 44364 362 1.065744 3.85799328 Naegleria 5761 Heterolobosea other_Eukaryota 647 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g43541 i0 98.898 34.9585635359116 363 3 100 1 1 362 4985 5347 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 12655 652 0.992331288343558 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6596376 6596376 PRJNA1111448_S_NODE_70946_length_309_cov_1.305085_g70123_i0 PRJNA1111448 70946 309 1.305085 4.03271265 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 555 1.7999999999999994e-153   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g70123 i0 99.032 45.9514563106796 310 2 100 1 1 309 2886 3195 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14199 555 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8675985 8675985 PRJNA1111448_S_NODE_37327_length_382_cov_3.653722_g36504_i0 PRJNA1111448 37327 382 3.653722 13.95721804 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 706 0   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g36504 i0 100 37.7905759162304 382 0 100 0 1 382 135 516 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 14436 706 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
9950581 9950581 PRJNA1111448_S_NODE_103848_length_267_cov_2.046392_g103025_i0 PRJNA1111448 103848 267 2.046392 5.46386664 Naegleria 5761 Heterolobosea other_Eukaryota 464 2.6499999999999993e-126   NTclustered gi|2618963742|gb|OR769034.1| 5762 g103025 i0 100 9.57303370786517 251 0 94 0 17 267 5706 5456 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2556 464 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10421703 10421703 PRJNA1111448_S_NODE_6689_length_670_cov_3.020101_g5969_i0 PRJNA1111448 6689 670 3.020101 20.2346767 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 1070 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5969 i0 96.734 19.7164179104478 643 20 96 1 26 667 3597 4239 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13210 1070 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
15520018 15520018 PRJNA1111448_S_NODE_112553_length_258_cov_2.081081_g111730_i0 PRJNA1111448 112553 258 2.081081 5.36918898 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 466 7.08e-127   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g111730 i0 99.228 55.6511627906977 259 1 100 1 1 258 2496 2754 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 14358 466 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
17600596 17600596 PRJNA1111448_S_NODE_68414_length_313_cov_1.604167_g67591_i0 PRJNA1111448 68414 313 1.604167 5.02104271 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 573 5.049999999999998e-159   NTclustered gi|89148133|gb|DQ388519.1| 373143 g67591 i0 99.681 79.2332268370607 313 1 100 0 1 313 2592 2280 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 24800 573 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
21424441 21424441 PRJNA1111448_S_NODE_106637_length_264_cov_2.230366_g105814_i0 PRJNA1111448 106637 264 2.230366 5.88816624 Naegleria 5761 Heterolobosea other_Eukaryota 488 1.5499999999999999e-133   NTclustered gi|32479131|gb|AY321362.1| 51634 g105814 i0 100 99.719696969697 264 0 100 0 1 264 732 995 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 26326 488 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
28804497 28804497 PRJNA1111448_S_NODE_119788_length_251_cov_2.162921_g118965_i0 PRJNA1111448 119788 251 2.162921 5.42893171 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 77 3.59e-14   NR XP_044549601.1 51637 g118965 i0 64.2 1.54183266932271 53 19 63.3 0 91 249 1932 1984 XP_044549601.1 uncharacterized protein C9374_003423 [Naegleria lovaniensis] diamond 387 77 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;