RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1111448" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 5 ✖

bioproject 1

  • PRJNA1111448 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4850605 4850605 PRJNA1111448_S_NODE_136024_length_242_cov_2.585799_g135201_i0 PRJNA1111448 136024 242 2.585799 6.25763358 Chroococcaceae 1890464 Bacteria Bacteria 401 1.8799999999999994e-107   NTclustered gi|222138150|gb|FJ589716.1| 588587 g135201 i0 99.103 113.925619834711 223 2 92 0 5 227 3150 2928 Gloeocapsopsis crepidinum LEGE 06123 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 27570 405 0.990123456790123 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Gloeocapsopsis Gloeocapsopsis crepidinum
9146245 9146245 PRJNA1111448_S_NODE_98648_length_273_cov_1.470000_g97825_i0 PRJNA1111448 98648 273 1.47 4.0131 Gloeocapsa sp. 20201027-1 2802214 Bacteria Bacteria 403 6.01e-108   NTclustered gi|1953559107|gb|MW449597.1| 2802214 g97825 i0 93.455 105.205128205128 275 12 100 5 1 273 285 555 Gloeocapsa sp. 20201027-1 23S ribosomal RNA gene, partial sequence blastn 28721 403 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Gloeocapsa Gloeocapsa sp. 20201027-1
20618355 20618355 PRJNA1111448_S_NODE_100257_length_271_cov_1.853535_g99434_i0 PRJNA1111448 100257 271 1.853535 5.02307985 Leptolyngbya sp. 7M 2812896 Bacteria Bacteria 375 1.3e-99   NTclustered gi|2028908486|gb|CP070897.1| 2812896 g99434 i0 91.912 162.760147601476 272 16 100 6 1 271 2151775 2151509 Leptolyngbya sp. 7M chromosome blastn 44108 375 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. 7M
20619144 20619144 PRJNA1111448_S_NODE_49197_length_350_cov_1.111913_g48374_i0 PRJNA1111448 49197 350 1.111913 3.8916955 Pseudanabaena galeata 1112103 Bacteria Bacteria 52.8 0.033   NTclustered gi|2498980257|gb|CP112874.1| 2602720 g48374 i0 100 0.08 28 0 8 0 186 213 1925941 1925914 Pseudanabaena galeata CCNP1313 chromosome, complete genome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Pseudanabaenales Pseudanabaenaceae Pseudanabaena Pseudanabaena galeata
28646988 28646988 PRJNA1111448_S_NODE_106907_length_264_cov_1.570681_g106084_i0 PRJNA1111448 106907 264 1.570681 4.14659784 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 42.7 0.0413   NR MEB3257286.1 2847862 g106084 i0 37.9 0.659090909090909 58 36 65.9 0 190 17 90 147 MEB3257286.1 urease accessory UreF family protein [Cyanobacteriota bacterium] diamond 174 42.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;