RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1111146" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111146 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11695662 11695662 PRJNA1111146_P_NODE_433790_length_177_cov_0.919355_g432652_i0 PRJNA1111146 433790 177 0.919355 1.62725835 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 97.4 4.570000000000001e-22   NR MFA7481282.1 3107663 g432652 i0 75.9 2.83050847457627 58 14 98.3 0 176 3 79 136 MFA7481282.1 amidohydrolase [Vulcanimicrobiota bacterium] diamond 501 97.4 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
27699975 27699975 PRJNA1111146_P_NODE_383344_length_180_cov_0.897638_g382206_i0 PRJNA1111146 383344 180 0.897638 1.6157484 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 67 3.06e-11   NR MFA5506278.1 3107663 g382206 i0 50 1 60 30 100 0 1 180 149 208 MFA5506278.1 metal-dependent transcriptional regulator [Vulcanimicrobiota bacterium] diamond 180 67 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
27888953 27888953 PRJNA1111146_P_NODE_352645_length_182_cov_0.883721_g351507_i0 PRJNA1111146 352645 182 0.883721 1.60837222 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 90.9 3.92e-20   NR MFA7479376.1 3107663 g351507 i0 70.7 0.956043956043956 58 17 95.6 0 1 174 197 254 MFA7479376.1 LysR family transcriptional regulator [Vulcanimicrobiota bacterium] diamond 174 90.9 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29878375 29878375 PRJNA1111146_P_NODE_192911_length_208_cov_1.090323_g191773_i0 PRJNA1111146 192911 208 1.090323 2.26787184 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 72.8 5.63e-13   NR MFA7482742.1 3107663 g191773 i0 61 1.71634615384615 59 23 85.1 0 201 25 332 390 MFA7482742.1 glycosyltransferase [Vulcanimicrobiota bacterium] diamond 357 72.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30099228 30099228 PRJNA1111146_P_NODE_123172_length_232_cov_1.245810_g122034_i0 PRJNA1111146 123172 232 1.24581 2.8902792 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 106 1.45e-24   NR MFA5506708.1 3107663 g122034 i0 87.9 0.75 58 7 75 0 59 232 551 608 MFA5506708.1 polyribonucleotide nucleotidyltransferase [Vulcanimicrobiota bacterium] diamond 174 106 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30415678 30415678 PRJNA1111146_P_NODE_220253_length_202_cov_1.530201_g219115_i0 PRJNA1111146 220253 202 1.530201 3.09100602 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 78.6 4.72e-15   NR MFA5504958.1 3107663 g219115 i0 52.2 0.995049504950495 67 32 99.5 0 202 2 226 292 MFA5504958.1 ABC transporter permease [Vulcanimicrobiota bacterium] diamond 201 78.6 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30731255 30731255 PRJNA1111146_P_NODE_213974_length_203_cov_2.126667_g212836_i0 PRJNA1111146 213974 203 2.126667 4.31713401 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 93.6 7.88e-21   NR MFN8607999.1 3107663 g212836 i0 65.7 3.96059113300493 67 23 99 0 2 202 149 215 MFN8607999.1 STM4014 family protein [Vulcanimicrobiota bacterium] diamond 804 93.6 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30921077 30921077 PRJNA1111146_P_NODE_344554_length_182_cov_2.643411_g343416_i0 PRJNA1111146 344554 182 2.643411 4.81100802 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 77.8 7.22e-15   NR MFA7483376.1 3107663 g343416 i0 58.9 1.84615384615385 56 23 92.3 0 3 170 210 265 MFA7483376.1 DNA ligase D [Vulcanimicrobiota bacterium] diamond 336 77.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32691394 32691394 PRJNA1111146_P_NODE_323740_length_184_cov_0.870229_g322602_i0 PRJNA1111146 323740 184 0.870229 1.60122136 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 110 4.38e-28   NR MFA5504023.1 3107663 g322602 i0 90 0.978260869565217 60 6 97.8 0 5 184 20 79 MFA5504023.1 Crp/Fnr family transcriptional regulator [Vulcanimicrobiota bacterium] diamond 180 110 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;