contig_metadata
8 rows where bioproject = "PRJNA1111146" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216256 | 216256 | PRJNA1111146_P_NODE_305521_length_186_cov_1.278195_g304383_i0 | PRJNA1111146 | 305521 | 186 | 1.278195 | 2.3774427 | Mermithidae sp. XT-2021 | 2814110 | Nematoda | Nematoda | 73.1 | 1.22e-8 | NTclustered | gi|1993669213|gb|MW653323.1| | 2814110 | g304383 | i0 | 93.75 | 25.4408602150538 | 48 | 3 | 26 | 0 | 139 | 186 | 462 | 509 | Mermithidae sp. XT-2021 voucher Mermithid-eriosoma auratum-2017 large subunit ribosomal RNA gene, partial sequence | blastn | 4732 | 73.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Enoplea | Mermithida | Mermithidae | Mermithidae sp. XT-2021 | ||
| 6594694 | 6594694 | PRJNA1111146_P_NODE_356286_length_182_cov_0.875969_g355148_i0 | PRJNA1111146 | 356286 | 182 | 0.875969 | 1.59426358 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 222 | 1.11e-53 | NTclustered | gi|2445347854|ref|XM_003109090.2| | 31234 | g355148 | i0 | 91.358 | 13.4395604395604 | 162 | 14 | 89 | 0 | 20 | 181 | 1137 | 1298 | Caenorhabditis remanei uncharacterized protein (GCK72_000540), partial mRNA | blastn | 2446 | 222 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 27817352 | 27817352 | PRJNA1111146_P_NODE_280244_length_190_cov_2.087591_g279106_i0 | PRJNA1111146 | 280244 | 190 | 2.087591 | 3.9664229 | Opisthokonta | 33154 | Nematoda | Nematoda | 92.4 | 1.35e-20 | NR | CDJ95608.1 | 6289 | g279106 | i0 | 66.7 | 18.0473684210526 | 60 | 19 | 94.7 | 1 | 181 | 2 | 3 | 61 | CDJ95608.1 Ribosomal protein L37e domain containing protein [Haemonchus contortus] | diamond | 3429 | 92.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Trichostrongylidae | Haemonchus | Haemonchus contortus | |
| 28457547 | 28457547 | PRJNA1111146_P_NODE_324126_length_184_cov_0.870229_g322988_i0 | PRJNA1111146 | 324126 | 184 | 0.870229 | 1.60122136 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 126 | 3.96e-32 | NR | KAE9549987.1 | 2598192 | g322988 | i0 | 93.3 | 0.978260869565217 | 60 | 4 | 97.8 | 0 | 3 | 182 | 75 | 134 | KAE9549987.1 hypothetical protein FO519_006807 [Halicephalobus sp. NKZ332] | diamond | 180 | 126 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 29404675 | 29404675 | PRJNA1111146_P_NODE_434749_length_177_cov_0.911290_g433611_i0 | PRJNA1111146 | 434749 | 177 | 0.91129 | 1.6129833 | Halicephalobus sp. NKZ332 | 2598192 | Nematoda | Nematoda | 98.2 | 4.04e-22 | NR | KAE9551092.1 | 2598192 | g433611 | i0 | 72.4 | 0.983050847457627 | 58 | 16 | 98.3 | 0 | 175 | 2 | 219 | 276 | KAE9551092.1 hypothetical protein FO519_005689 [Halicephalobus sp. NKZ332] | diamond | 174 | 98.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Panagrolaimidae | Halicephalobus | Halicephalobus sp. NKZ332 | |
| 31996090 | 31996090 | PRJNA1111146_P_NODE_69958_length_265_cov_1.358491_g68820_i0 | PRJNA1111146 | 69958 | 265 | 1.358491 | 3.60000115 | Aphelenchoides besseyi | 269767 | Nematoda | Nematoda | 52.4 | 1.96e-5 | NR | KAI6178625.1 | 269767 | g68820 | i0 | 47.8 | 0.781132075471698 | 69 | 35 | 77 | 1 | 264 | 61 | 426 | 494 | KAI6178625.1 Cyclin domain protein [Aphelenchoides besseyi] | diamond | 207 | 52.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Aphelenchoididae | Aphelenchoides | Aphelenchoides besseyi | |
| 32439270 | 32439270 | PRJNA1111146_P_NODE_283379_length_190_cov_1.248175_g282241_i0 | PRJNA1111146 | 283379 | 190 | 1.248175 | 2.3715325 | Caenorhabditis brenneri | 135651 | Nematoda | Nematoda | 118 | 3.66e-29 | NR | EGT30756.1 | 135651 | g282241 | i0 | 93.5 | 0.978947368421053 | 62 | 4 | 97.9 | 0 | 3 | 188 | 1235 | 1296 | EGT30756.1 hypothetical protein CAEBREN_28118 [Caenorhabditis brenneri] | diamond | 186 | 118 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis brenneri | |
| 32565851 | 32565851 | PRJNA1111146_P_NODE_368919_length_181_cov_0.890625_g367781_i0 | PRJNA1111146 | 368919 | 181 | 0.890625 | 1.61203125 | Caenorhabditis brenneri | 135651 | Nematoda | Nematoda | 57.4 | 1.06e-7 | NR | EGT43234.1 | 135651 | g367781 | i0 | 62.8 | 0.712707182320442 | 43 | 16 | 71.3 | 0 | 149 | 21 | 394 | 436 | EGT43234.1 CBN-NHR-137 protein [Caenorhabditis brenneri] | diamond | 129 | 57.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis brenneri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;