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contig_metadata

24 rows where bioproject = "PRJNA1111146" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1111146 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
216146 216146 PRJNA1111146_P_NODE_277701_length_191_cov_1.289855_g276563_i0 PRJNA1111146 277701 191 1.289855 2.46362305 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 326 8.77e-85   NTclustered gi|110645063|gb|DQ665311.1| 151077 g276563 i0 98.378 35.2565445026178 185 3 97 0 1 185 722 906 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 6734 326 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
2297437 2297437 PRJNA1111146_P_NODE_381622_length_180_cov_1.212598_g380484_i0 PRJNA1111146 381622 180 1.212598 2.1826764 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 333 4.87e-87   NTclustered gi|27530358|dbj|AB035329.1| 5911 g380484 i0 100 2 180 0 100 0 1 180 318 139 Tetrahymena thermophila MYO6 mRNA for myosin, partial cds blastn 360 333 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6124539 6124539 PRJNA1111146_P_NODE_17905_length_386_cov_1.804805_g16769_i0 PRJNA1111146 17905 386 1.804805 6.9665473 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 601 2.9199999999999998e-167   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g16769 i0 94.805 97.520725388601 385 20 99 0 2 386 10 394 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 37643 601 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6125330 6125330 PRJNA1111146_P_NODE_86605_length_251_cov_4.237374_g85467_i0 PRJNA1111146 86605 251 4.237374 10.63580874 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 283 7.409999999999999e-72   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g85467 i0 97.576 74.5099601593625 165 4 66 0 87 251 3082 2918 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 18702 283 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9143873 9143873 PRJNA1111146_P_NODE_284848_length_190_cov_1.021898_g283710_i0 PRJNA1111146 284848 190 1.021898 1.9416062 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 302 1.47e-77   NTclustered gi|300676719|gb|GQ377693.1| 151077 g283710 i0 95.263 2.7 190 9 100 0 1 190 291 102 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 513 302 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9144655 9144655 PRJNA1111146_P_NODE_444088_length_173_cov_2.266667_g442950_i0 PRJNA1111146 444088 173 2.266667 3.92133391 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 309 7.81e-80   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g442950 i0 99.412 57.7803468208092 170 1 98 0 2 171 814 645 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9996 309 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
10420337 10420337 PRJNA1111146_P_NODE_417249_length_178_cov_0.912000_g416111_i0 PRJNA1111146 417249 178 0.912 1.62336 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 63.9 4.27e-10   NR CAD8083269.1 5886 g416111 i0 78.4 0.623595505617977 37 8 62.4 0 43 153 281 317 CAD8083269.1 unnamed protein product [Paramecium primaurelia] diamond 111 63.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
11694401 11694401 PRJNA1111146_P_NODE_161650_length_217_cov_0.835366_g160512_i0 PRJNA1111146 161650 217 0.835366 1.81274422 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 344 2.8199999999999993e-90   NTclustered gi|2651357788|gb|PP174303.1| 41631 g160512 i0 95.392 71.2258064516129 217 8 100 2 1 217 3575 3361 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15456 344 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
21423424 21423424 PRJNA1111146_P_NODE_123837_length_232_cov_0.921788_g122699_i0 PRJNA1111146 123837 232 0.921788 2.13854816 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 429 8.2e-116   NTclustered gi|1202134875|gb|KY454454.1| 63136 g122699 i0 100 98.9439655172414 232 0 100 0 1 232 232 1 Colpoda steinii 18S ribosomal RNA gene, partial sequence blastn 22955 429 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda steini
26592773 26592773 PRJNA1111146_P_NODE_336421_length_183_cov_0.876923_g335283_i0 PRJNA1111146 336421 183 0.876923 1.60476909 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.36e-6   NR XP_004025216.1 5932 g335283 i0 54.2 0.786885245901639 48 22 78.7 0 149 6 131 178 XP_004025216.1 hypothetical protein IMG5_189650 [Ichthyophthirius multifiliis] diamond 144 54.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27004439 27004439 PRJNA1111146_P_NODE_337742_length_183_cov_0.876923_g336604_i0 PRJNA1111146 337742 183 0.876923 1.60476909 Paramecium pentaurelia 43138 SAR_Eukaryotes SAR_Eukaryotes 94.4 1.1e-20   NR CAD8214164.1 43138 g336604 i0 95.8 0.786885245901639 48 2 78.7 0 18 161 1 48 CAD8214164.1 unnamed protein product [Paramecium pentaurelia] diamond 144 94.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
28994457 28994457 PRJNA1111146_P_NODE_390568_length_180_cov_0.881890_g389430_i0 PRJNA1111146 390568 180 0.88189 1.587402 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 60.8 4.66e-9   NR XP_004031019.1 5932 g389430 i0 51.7 1 60 28 98.3 1 1 177 72 131 XP_004031019.1 ribosomal protein, putative [Ichthyophthirius multifiliis] diamond 180 60.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29246703 29246703 PRJNA1111146_P_NODE_391169_length_180_cov_0.874016_g390031_i0 PRJNA1111146 391169 180 0.874016 1.5732288 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 59.3 2.31e-8   NR CAD8082159.1 65129 g390031 i0 75 0.466666666666667 28 7 46.7 0 135 52 20 47 CAD8082159.1 unnamed protein product [Paramecium sonneborni] diamond 84 59.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
29499282 29499282 PRJNA1111146_P_NODE_410230_length_178_cov_1.792000_g409092_i0 PRJNA1111146 410230 178 1.792 3.18976 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.84e-9   NR CAD8089428.1 5886 g409092 i0 42.4 2.98314606741573 59 33 97.8 1 1 174 668 726 CAD8089428.1 unnamed protein product [Paramecium primaurelia] diamond 531 62.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
29742932 29742932 PRJNA1111146_P_NODE_184610_length_209_cov_2.044872_g183472_i0 PRJNA1111146 184610 209 2.044872 4.27378248 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 53.1 5.02e-6   NR XP_001425240.1 5888 g183472 i0 66.7 0.77511961722488 27 9 38.8 0 81 1 6 32 XP_001425240.1 uncharacterized protein GSPATT00028877001 [Paramecium tetraurelia] diamond 162 53.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
29774604 29774604 PRJNA1111146_P_NODE_129931_length_229_cov_1.261364_g128793_i0 PRJNA1111146 129931 229 1.261364 2.88852356 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 107 2.7600000000000004e-27   NR XP_004039379.1 5932 g128793 i0 68.9 3.87772925764192 74 22 96.9 1 3 224 10 82 XP_004039379.1 hypothetical protein IMG5_024460 [Ichthyophthirius multifiliis] diamond 888 107 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30415709 30415709 PRJNA1111146_P_NODE_51353_length_286_cov_1.454936_g50216_i0 PRJNA1111146 51353 286 1.454936 4.16111696 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 62.8 5.44e-10   NR XP_004024378.1 5932 g50216 i0 42.4 0.891608391608392 85 49 89.2 0 1 255 53 137 XP_004024378.1 ribosomal protein, putative [Ichthyophthirius multifiliis] diamond 255 62.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30690845 30690845 PRJNA1111146_P_NODE_308433_length_185_cov_1.727273_g307295_i0 PRJNA1111146 308433 185 1.727273 3.19545505 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 63.5 1.73e-10   NR CDW86644.1 5949 g307295 i0 52.5 1.92972972972973 59 27 94.1 1 176 3 53 111 CDW86644.1 domain iii family protein [Stylonychia lemnae] diamond 357 63.9 0.993740219092332 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30763009 30763009 PRJNA1111146_P_NODE_411954_length_178_cov_1.368000_g410816_i0 PRJNA1111146 411954 178 1.368 2.43504 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 80.1 7.11e-16   NR KRX00676.1 266149 g410816 i0 62.5 0.943820224719101 56 21 94.4 0 176 9 289 344 KRX00676.1 hypothetical protein PPERSA_00903 [Pseudocohnilembus persalinus] diamond 168 80.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31268517 31268517 PRJNA1111146_P_NODE_207135_length_205_cov_1.157895_g205997_i0 PRJNA1111146 207135 205 1.157895 2.37368475 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 46.6 9.46e-4   NR CAD8142665.1 43137 g205997 i0 41.5 1.5219512195122 53 31 77.6 0 204 46 233 285 CAD8142665.1 unnamed protein product [Paramecium octaurelia] diamond 312 46.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
31616415 31616415 PRJNA1111146_P_NODE_68496_length_266_cov_1.892019_g67358_i0 PRJNA1111146 68496 266 1.892019 5.03277054 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 55.1 5.58e-7   NR CDW86772.1 5949 g67358 i0 44.6 0.733082706766917 65 33 69.9 1 256 71 75 139 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 195 55.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32619744 32619744 PRJNA1111146_P_NODE_388020_length_180_cov_0.889764_g386882_i0 PRJNA1111146 388020 180 0.889764 1.6015752 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 97.8 8.52e-23   NR XP_001024921.3 312017 g386882 i0 72.9 1.96666666666667 59 16 98.3 0 179 3 208 266 XP_001024921.3 cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis protein [Tetrahymena thermophila SB210] diamond 354 98.6 0.991886409736308 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
32650994 32650994 PRJNA1111146_P_NODE_431540_length_177_cov_0.919355_g430402_i0 PRJNA1111146 431540 177 0.919355 1.62725835 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 60.8 4.75e-9   NR CAD8090225.1 5886 g430402 i0 55.1 2.42372881355932 49 21 81.4 1 33 176 158 206 CAD8090225.1 unnamed protein product [Paramecium primaurelia] diamond 429 61.2 0.993464052287582 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
32754476 32754476 PRJNA1111146_P_NODE_307460_length_185_cov_2.333333_g306322_i0 PRJNA1111146 307460 185 2.333333 4.31666605 Paramecium pentaurelia 43138 SAR_Eukaryotes SAR_Eukaryotes 111 9.43e-27   NR CAD8210612.1 43138 g306322 i0 91.4 0.940540540540541 58 5 94.1 0 1 174 97 154 CAD8210612.1 unnamed protein product [Paramecium pentaurelia] diamond 174 111 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;