RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA1111146" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA1111146 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5318745 5318745 PRJNA1111146_P_NODE_198645_length_206_cov_2.941176_g197507_i0 PRJNA1111146 198645 206 2.941176 6.05882256 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 259 9.89e-65   NTclustered gi|820695469|tpe|LN714488.1| 572307 g197507 i0 89.32 11.7572815533981 206 22 100 0 1 206 299706 299911 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2422 259 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6594277 6594277 PRJNA1111146_P_NODE_262166_length_194_cov_1.219858_g261028_i0 PRJNA1111146 262166 194 1.219858 2.36652452 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 300 5.420000000000001e-77   NTclustered gi|820695469|tpe|LN714488.1| 572307 g261028 i0 95.699 5.88144329896907 186 8 96 0 1 186 157426 157611 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1141 300 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10419015 10419015 PRJNA1111146_P_NODE_110909_length_238_cov_1.081081_g109771_i0 PRJNA1111146 110909 238 1.081081 2.57297278 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 344 3.15e-90   NTclustered gi|820695469|tpe|LN714488.1| 572307 g109771 i0 92.857 19.4705882352941 238 16 100 1 1 238 300628 300392 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 4634 344 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10420628 10420628 PRJNA1111146_P_NODE_67269_length_268_cov_0.920930_g66131_i0 PRJNA1111146 67269 268 0.92093 2.4680924 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 357 4.64e-94   NTclustered gi|820695469|tpe|LN714488.1| 572307 g66131 i0 90.672 34.2126865671642 268 25 100 0 1 268 301650 301917 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 9169 357 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11695689 11695689 PRJNA1111146_P_NODE_440710_length_176_cov_2.756098_g439572_i0 PRJNA1111146 440710 176 2.756098 4.85073248 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|1027959202|ref|XM_737592.2| 31271 g439572 i0 100 0.164772727272727 29 0 16 0 120 148 2020 1992 Plasmodium chabaudi chabaudi conserved Plasmodium protein, unknown function (PCHAS_1410500), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
12969422 12969422 PRJNA1111146_P_NODE_113291_length_237_cov_0.885870_g112153_i0 PRJNA1111146 113291 237 0.88587 2.0995119 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 292 1.15e-74   NTclustered gi|820695469|tpe|LN714488.1| 572307 g112153 i0 89.03 1.9662447257384 237 24 100 2 1 237 80496 80262 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 466 292 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
12969623 12969623 PRJNA1111146_P_NODE_17371_length_390_cov_9.148368_g16236_i0 PRJNA1111146 17371 390 9.148368 35.6786352 Gregarina sp. Phaedon/Daegwallyeong/2010 1049247 SAR_Eukaryotes SAR_Eukaryotes 276 2.03e-69   NTclustered gi|339715944|gb|JF412715.1| 1049247 g16236 i0 79.661 67.4025641025641 413 60 100 18 1 390 4097 4508 Gregarina sp. Phaedon/Daegwallyeong/2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and 28S-18S intergenic spacer, partial sequence blastn 26287 276 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina sp. Phaedon/Daegwallyeong/2010
12970021 12970021 PRJNA1111146_P_NODE_2691_length_1190_cov_4.875110_g1818_i0 PRJNA1111146 2691 1190 4.87511 58.013809 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 2060 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g1818 i0 98.22 1360.48487394958 1180 18 99 1 14 1190 1913 734 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 1618977 2060 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
14245951 14245951 PRJNA1111146_P_NODE_51032_length_286_cov_3.489270_g49895_i0 PRJNA1111146 51032 286 3.48927 9.9793122 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 468 2.21e-127   NTclustered gi|820695469|tpe|LN714488.1| 572307 g49895 i0 97.112 3.21328671328671 277 8 97 0 3 279 117378 117654 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 919 468 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
15519775 15519775 PRJNA1111146_P_NODE_80293_length_256_cov_1.600985_g79155_i0 PRJNA1111146 80293 256 1.600985 4.0985216 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 337 5.74e-88   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g79155 i0 90.625 24.4140625 256 20 100 3 1 256 373 122 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 6250 337 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
19342803 19342803 PRJNA1111146_P_NODE_43376_length_298_cov_2.636735_g42239_i0 PRJNA1111146 43376 298 2.636735 7.8574703 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 394 3.99e-105   NTclustered gi|820695469|tpe|LN714488.1| 572307 g42239 i0 90.604 15.5201342281879 298 27 100 1 1 297 157179 157476 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 4625 394 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20617028 20617028 PRJNA1111146_P_NODE_20337_length_370_cov_1.444795_g19200_i0 PRJNA1111146 20337 370 1.444795 5.3457415 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 505 2.249999999999999e-138   NTclustered gi|820695469|tpe|LN714488.1| 572307 g19200 i0 91.351 6.9027027027027 370 30 100 2 1 369 157444 157812 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 2554 505 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21892378 21892378 PRJNA1111146_P_NODE_117058_length_235_cov_1.010989_g115920_i0 PRJNA1111146 117058 235 1.010989 2.37582415 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 285 1.91e-72   NTclustered gi|820695469|tpe|LN714488.1| 572307 g115920 i0 88.559 33.8425531914894 236 25 100 2 1 235 301734 301500 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7953 285 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
23974230 23974230 PRJNA1111146_P_NODE_340159_length_183_cov_0.869231_g339021_i0 PRJNA1111146 340159 183 0.869231 1.59069273 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.35e-4   NTclustered gi|1145257365|ref|XM_020114577.1| 5854 g339021 i0 92.683 0.672131147540984 41 2 22 1 85 124 3658 3618 Plasmodium reichenowi putative membrane protein partial mRNA blastn 123 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
25248437 25248437 PRJNA1111146_P_NODE_403540_length_179_cov_0.896825_g402402_i0 PRJNA1111146 403540 179 0.896825 1.60531675 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2785763289|ref|XM_067216604.1| 5824 g402402 i0 100 0.312849162011173 28 0 16 0 69 96 2408 2381 Plasmodium brasilianum uncharacterized protein (MKS88_003507), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
30952652 30952652 PRJNA1111146_P_NODE_144014_length_223_cov_1.335294_g142876_i0 PRJNA1111146 144014 223 1.335294 2.97770562 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 75.9 3.32e-14   NR XP_029221480.1 94643 g142876 i0 57.8 4.30493273542601 64 27 86.1 0 204 13 112 175 XP_029221480.1 ribosomal protein RPP0 [Besnoitia besnoiti] diamond 960 75.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;