RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1111146", tax_kingdom = "Thermoproteati" and tax_phylum = "Thermoproteota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

  • Thermoproteati · 5 ✖

bioproject 1

  • PRJNA1111146 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5319176 5319176 PRJNA1111146_P_NODE_296565_length_187_cov_2.276119_g295427_i0 PRJNA1111146 296565 187 2.276119 4.25634253 Pyrobaculum aerophilum 13773 Archaea Archaea 346 6.56e-91   NTclustered gi|18308975|gb|AE009441.1| 178306 g295427 i0 100 1 187 0 100 0 1 187 661081 661267 Pyrobaculum aerophilum str. IM2, complete genome blastn 187 346 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
12970723 12970723 PRJNA1111146_P_NODE_418531_length_178_cov_0.904000_g417393_i0 PRJNA1111146 418531 178 0.904 1.60912 Pyrobaculum aerophilum 13773 Archaea Archaea 329 6.21e-86   NTclustered gi|18308975|gb|AE009441.1| 178306 g417393 i0 100 1.15730337078652 178 0 100 0 1 178 1209044 1208867 Pyrobaculum aerophilum str. IM2, complete genome blastn 206 329 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
27447282 27447282 PRJNA1111146_P_NODE_338023_length_183_cov_0.876923_g336885_i0 PRJNA1111146 338023 183 0.876923 1.60476909 Sulfolobales archaeon 2268200 Archaea Archaea 128 2.5e-34   NR MEM2204469.1 2268200 g336885 i0 100 1 61 0 100 0 1 183 132 192 MEM2204469.1 DNA methyltransferase [Sulfolobales archaeon] diamond 183 128 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
28173135 28173135 PRJNA1111146_P_NODE_390046_length_180_cov_0.881890_g388908_i0 PRJNA1111146 390046 180 0.88189 1.587402 Desulfurococcaceae archaeon 2184738 Archaea Archaea 115 1.3199999999999999e-28   NR PWV36622.1 2184738 g388908 i0 94.9 0.983333333333333 59 3 98.3 0 179 3 318 376 PWV36622.1 MAG: amidase [Desulfurococcaceae archaeon] diamond 177 115 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
31616396 31616396 PRJNA1111146_P_NODE_277016_length_191_cov_1.579710_g275878_i0 PRJNA1111146 277016 191 1.57971 3.0172461 Thermoproteota archaeon 2056631 Archaea Archaea 115 4.4699999999999995e-30   NR MDQ5868535.1 2056631 g275878 i0 84.1 0.989528795811518 63 10 99 0 2 190 17 79 MDQ5868535.1 sulfurtransferase [Thermoproteota archaeon] diamond 189 115 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;