contig_metadata
74 rows where bioproject = "PRJNA1111146", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215905 | 215905 | PRJNA1111146_P_NODE_216001_length_203_cov_1.493333_g214863_i0 | PRJNA1111146 | 216001 | 203 | 1.493333 | 3.03146599 | Campylobacter showae | 204 | Bacteria | Bacteria | 298 | 2.06e-76 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g214863 | i0 | 93.103 | 1.99507389162562 | 203 | 14 | 100 | 0 | 1 | 203 | 21802 | 22004 | Campylobacter showae genome assembly, plasmid: V | blastn | 405 | 298 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 1021750 | 1021750 | PRJNA1111146_P_NODE_303721_length_186_cov_1.691729_g302583_i0 | PRJNA1111146 | 303721 | 186 | 1.691729 | 3.1466159399999998 | root | 1 | Root_unresolved | Root_unresolved | 344 | 2.34e-90 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g302583 | i0 | 100 | 113.639784946237 | 186 | 0 | 100 | 0 | 1 | 186 | 315320 | 315505 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 21137 | 344 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 1491605 | 1491605 | PRJNA1111146_P_NODE_437962_length_177_cov_0.903226_g436824_i0 | PRJNA1111146 | 437962 | 177 | 0.903226 | 1.59871002 | Helicobacter mastomyrinus | 287948 | Bacteria | Bacteria | 316 | 4.799999999999999e-82 | NTclustered | gi|2727596528|gb|CP145316.1| | 287948 | g436824 | i0 | 98.87 | 1.34463276836158 | 177 | 2 | 100 | 0 | 1 | 177 | 652952 | 653128 | Helicobacter mastomyrinus strain Hm-17 chromosome, complete genome | blastn | 238 | 316 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter mastomyrinus | ||
| 2297582 | 2297582 | PRJNA1111146_P_NODE_449282_length_167_cov_2.798246_g448144_i0 | PRJNA1111146 | 449282 | 167 | 2.798246 | 4.67307082 | Bacteria | 2 | Bacteria | Bacteria | 296 | 5.86e-76 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g448144 | i0 | 98.795 | 19.8802395209581 | 166 | 2 | 99 | 0 | 1 | 166 | 4937 | 5102 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 3320 | 296 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 2767587 | 2767587 | PRJNA1111146_P_NODE_437183_length_177_cov_0.911290_g436045_i0 | PRJNA1111146 | 437183 | 177 | 0.91129 | 1.6129833 | Campylobacter concisus | 199 | Bacteria | Bacteria | 305 | 1.04e-78 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g436045 | i0 | 97.74 | 17.9774011299435 | 177 | 4 | 100 | 0 | 1 | 177 | 290687 | 290511 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 3182 | 305 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 4043086 | 4043086 | PRJNA1111146_P_NODE_296484_length_187_cov_2.350746_g295346_i0 | PRJNA1111146 | 296484 | 187 | 2.350746 | 4.39589502 | Campylobacter concisus | 199 | Bacteria | Bacteria | 346 | 6.56e-91 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g295346 | i0 | 100 | 234.743315508021 | 187 | 0 | 100 | 0 | 1 | 187 | 656967 | 656781 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 43897 | 346 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 6124481 | 6124481 | PRJNA1111146_P_NODE_156245_length_218_cov_2.066667_g155107_i0 | PRJNA1111146 | 156245 | 218 | 2.066667 | 4.50533406 | Bacteria | 2 | Bacteria | Bacteria | 372 | 1.3e-98 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g155107 | i0 | 100 | 19.3623853211009 | 201 | 0 | 92 | 0 | 3 | 203 | 5259 | 5459 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 4221 | 372 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 6594321 | 6594321 | PRJNA1111146_P_NODE_271186_length_192_cov_1.625899_g270048_i0 | PRJNA1111146 | 271186 | 192 | 1.625899 | 3.12172608 | Campylobacter showae | 204 | Bacteria | Bacteria | 322 | 1.14e-83 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g270048 | i0 | 96.875 | 4 | 192 | 6 | 100 | 0 | 1 | 192 | 669527 | 669336 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 768 | 322 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 6594611 | 6594611 | PRJNA1111146_P_NODE_336166_length_183_cov_0.876923_g335028_i0 | PRJNA1111146 | 336166 | 183 | 0.876923 | 1.60476909 | Campylobacter concisus | 199 | Bacteria | Bacteria | 311 | 2.33e-80 | NTclustered | gi|1938715890|gb|CP049263.1| | 199 | g335028 | i0 | 97.268 | 16.879781420765 | 183 | 5 | 100 | 0 | 1 | 183 | 1094744 | 1094562 | Campylobacter concisus strain H16O-S1 chromosome, complete genome | blastn | 3089 | 311 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 6594849 | 6594849 | PRJNA1111146_P_NODE_390346_length_180_cov_0.881890_g389208_i0 | PRJNA1111146 | 390346 | 180 | 0.88189 | 1.587402 | Campylobacter rectus | 203 | Bacteria | Bacteria | 274 | 2.99e-69 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g389208 | i0 | 94.413 | 1.98888888888889 | 179 | 9 | 99 | 1 | 1 | 178 | 2520508 | 2520330 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 358 | 274 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 8675146 | 8675146 | PRJNA1111146_P_NODE_332427_length_183_cov_1.684615_g331289_i0 | PRJNA1111146 | 332427 | 183 | 1.684615 | 3.08284545 | Bacteria | 2 | Bacteria | Bacteria | 147 | 6.949999999999999e-31 | NTclustered | gi|2021360614|gb|MW854379.1| | 352960 | g331289 | i0 | 93 | 112.661202185792 | 100 | 7 | 55 | 0 | 39 | 138 | 91 | 190 | Uncultured Campylobacterales bacterium clone DN1988 23S ribosomal RNA gene, partial sequence | blastn | 20617 | 147 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | uncultured Campylobacterales bacterium | ||||
| 9144034 | 9144034 | PRJNA1111146_P_NODE_322408_length_184_cov_1.122137_g321270_i0 | PRJNA1111146 | 322408 | 184 | 1.122137 | 2.06473208 | Campylobacter concisus | 199 | Bacteria | Bacteria | 285 | 1.42e-72 | NTclustered | gi|1938719709|gb|CP049264.1| | 199 | g321270 | i0 | 94.565 | 12.7010869565217 | 184 | 10 | 100 | 0 | 1 | 184 | 1722809 | 1722626 | Campylobacter concisus strain P11CDO-S1 chromosome, complete genome | blastn | 2337 | 285 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 10419885 | 10419885 | PRJNA1111146_P_NODE_328889_length_184_cov_0.862595_g327751_i0 | PRJNA1111146 | 328889 | 184 | 0.862595 | 1.5871748 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 316 | 5.04e-82 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g327751 | i0 | 97.814 | 3.9945652173913 | 183 | 4 | 99 | 0 | 1 | 183 | 1108703 | 1108885 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 735 | 316 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 12500838 | 12500838 | PRJNA1111146_P_NODE_363090_length_181_cov_1.507812_g361952_i0 | PRJNA1111146 | 363090 | 181 | 1.507812 | 2.72913972 | Campylobacter | 194 | Bacteria | Bacteria | 294 | 2.31e-75 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g361952 | i0 | 96.133 | 3.94475138121547 | 181 | 5 | 100 | 2 | 1 | 181 | 1214854 | 1214676 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 714 | 294 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 13774888 | 13774888 | PRJNA1111146_P_NODE_203171_length_206_cov_1.071895_g202033_i0 | PRJNA1111146 | 203171 | 206 | 1.071895 | 2.2081037 | Campylobacter | 194 | Bacteria | Bacteria | 370 | 4.38e-98 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g202033 | i0 | 99.029 | 150.684466019417 | 206 | 2 | 100 | 0 | 1 | 206 | 31194 | 30989 | Campylobacter showae genome assembly, plasmid: V | blastn | 31041 | 370 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 14244470 | 14244470 | PRJNA1111146_P_NODE_126052_length_231_cov_0.943820_g124914_i0 | PRJNA1111146 | 126052 | 231 | 0.94382 | 2.1802242 | Campylobacter concisus | 199 | Bacteria | Bacteria | 372 | 1.39e-98 | NTclustered | gi|1938717787|gb|CP060705.1| | 199 | g124914 | i0 | 95.671 | 12.8095238095238 | 231 | 10 | 100 | 0 | 1 | 231 | 1205081 | 1204851 | Campylobacter concisus strain P13UCO-S1 chromosome, complete genome | blastn | 2959 | 372 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 15518452 | 15518452 | PRJNA1111146_P_NODE_189273_length_208_cov_1.974194_g188135_i0 | PRJNA1111146 | 189273 | 208 | 1.974194 | 4.10632352 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 187 | 4.79e-43 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g188135 | i0 | 99.038 | 3.06730769230769 | 104 | 1 | 98 | 0 | 1 | 104 | 431560 | 431457 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 638 | 187 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 15519178 | 15519178 | PRJNA1111146_P_NODE_354193_length_182_cov_0.883721_g353055_i0 | PRJNA1111146 | 354193 | 182 | 0.883721 | 1.60837222 | Campylobacter concisus | 199 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|1935893765|gb|CP049234.1| | 199 | g353055 | i0 | 100 | 21.6373626373626 | 182 | 0 | 100 | 0 | 1 | 182 | 1810262 | 1810081 | Campylobacter concisus strain P15UCO-S2 chromosome, complete genome | blastn | 3938 | 337 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 16793393 | 16793393 | PRJNA1111146_P_NODE_287894_length_189_cov_1.566176_g286756_i0 | PRJNA1111146 | 287894 | 189 | 1.566176 | 2.96007264 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 289 | 1.14e-73 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g286756 | i0 | 94.18 | 2 | 189 | 11 | 100 | 0 | 1 | 189 | 921992 | 921804 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 378 | 289 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 16794100 | 16794100 | PRJNA1111146_P_NODE_448034_length_169_cov_2.077586_g446896_i0 | PRJNA1111146 | 448034 | 169 | 2.077586 | 3.51112034 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 268 | 1.29e-67 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g446896 | i0 | 95.266 | 3 | 169 | 8 | 100 | 0 | 1 | 169 | 665893 | 666061 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 507 | 268 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 17599635 | 17599635 | PRJNA1111146_P_NODE_349394_length_182_cov_1.310078_g348256_i0 | PRJNA1111146 | 349394 | 182 | 1.310078 | 2.38434196 | FCB group | 1783270 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g348256 | i0 | 100 | 23.532967032967 | 182 | 0 | 100 | 0 | 1 | 182 | 4324 | 4143 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 4283 | 337 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 18067533 | 18067533 | PRJNA1111146_P_NODE_201475_length_206_cov_1.411765_g200337_i0 | PRJNA1111146 | 201475 | 206 | 1.411765 | 2.9082359 | Campylobacter concisus | 199 | Bacteria | Bacteria | 353 | 4.41e-93 | NTclustered | gi|1938715890|gb|CP049263.1| | 199 | g200337 | i0 | 97.573 | 17.9417475728155 | 206 | 5 | 100 | 0 | 1 | 206 | 1931755 | 1931960 | Campylobacter concisus strain H16O-S1 chromosome, complete genome | blastn | 3696 | 353 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 18068365 | 18068365 | PRJNA1111146_P_NODE_394195_length_179_cov_1.777778_g393057_i0 | PRJNA1111146 | 394195 | 179 | 1.777778 | 3.18222262 | Campylobacter showae | 204 | Bacteria | Bacteria | 320 | 3.76e-83 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g393057 | i0 | 98.883 | 11 | 179 | 2 | 100 | 0 | 1 | 179 | 16041 | 16219 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 1969 | 320 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 18873434 | 18873434 | PRJNA1111146_P_NODE_30255_length_328_cov_2.476364_g29118_i0 | PRJNA1111146 | 30255 | 328 | 2.476364 | 8.12247392 | Campylobacter | 194 | Bacteria | Bacteria | 584 | 2.459999999999999e-162 | NTclustered | gi|1938726479|gb|CP049270.1| | 199 | g29118 | i0 | 98.78 | 229.780487804878 | 328 | 4 | 100 | 0 | 1 | 328 | 1054521 | 1054194 | Campylobacter concisus strain P26UCO-S2 chromosome, complete genome | blastn | 75368 | 584 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 19342412 | 19342412 | PRJNA1111146_P_NODE_354476_length_182_cov_0.875969_g353338_i0 | PRJNA1111146 | 354476 | 182 | 0.875969 | 1.59426358 | Campylobacter fetus | 196 | Bacteria | Bacteria | 331 | 1.7800000000000002e-86 | NTclustered | gi|1043914323|gb|CP014570.1| | 32020 | g353338 | i0 | 99.451 | 1 | 182 | 1 | 100 | 0 | 1 | 182 | 20478 | 20659 | Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence | blastn | 182 | 331 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter fetus | ||
| 19342806 | 19342806 | PRJNA1111146_P_NODE_434396_length_177_cov_0.919355_g433258_i0 | PRJNA1111146 | 434396 | 177 | 0.919355 | 1.62725835 | Campylobacter showae | 204 | Bacteria | Bacteria | 300 | 4.84e-77 | NTclustered | gi|1483583493|emb|LT631417.1| | 204 | g433258 | i0 | 97.175 | 12 | 177 | 5 | 100 | 0 | 1 | 177 | 258561 | 258385 | Campylobacter showae genome assembly, chromosome: I | blastn | 2124 | 300 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 21424334 | 21424334 | PRJNA1111146_P_NODE_77817_length_258_cov_1.541463_g76679_i0 | PRJNA1111146 | 77817 | 258 | 1.541463 | 3.97697454 | FCB group | 1783270 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g76679 | i0 | 100 | 86.6976744186046 | 258 | 0 | 100 | 0 | 1 | 258 | 6096 | 6353 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 22368 | 477 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 21893331 | 21893331 | PRJNA1111146_P_NODE_358498_length_182_cov_0.868217_g357360_i0 | PRJNA1111146 | 358498 | 182 | 0.868217 | 1.58015494 | Campylobacter concisus | 199 | Bacteria | Bacteria | 315 | 1.79e-81 | NTclustered | gi|2700477995|gb|CP147775.1| | 199 | g357360 | i0 | 97.814 | 18.1098901098901 | 183 | 3 | 100 | 1 | 1 | 182 | 992696 | 992514 | Campylobacter concisus strain RMIT-O23 chromosome | blastn | 3296 | 315 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 21893372 | 21893372 | PRJNA1111146_P_NODE_367098_length_181_cov_0.890625_g365960_i0 | PRJNA1111146 | 367098 | 181 | 0.890625 | 1.61203125 | Poseidonibacter lekithochrous | 1904463 | Bacteria | Bacteria | 183 | 5.229999999999998e-42 | NTclustered | gi|1850313845|gb|CP054052.1| | 1904463 | g365960 | i0 | 85.714 | 4.94475138121547 | 175 | 23 | 96 | 2 | 2 | 175 | 436876 | 436703 | Poseidonibacter lekithochrous strain DSM 100870 chromosome, complete genome | blastn | 895 | 183 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Poseidonibacter | Poseidonibacter lekithochrous | ||
| 21893409 | 21893409 | PRJNA1111146_P_NODE_371938_length_181_cov_0.882812_g370800_i0 | PRJNA1111146 | 371938 | 181 | 0.882812 | 1.59788972 | Campylobacter gracilis | 824 | Bacteria | Bacteria | 252 | 1.41e-62 | NTclustered | gi|909717139|gb|CP012196.1| | 824 | g370800 | i0 | 94.012 | 1.84530386740331 | 167 | 9 | 92 | 1 | 1 | 167 | 680945 | 681110 | Campylobacter gracilis strain ATCC 33236, complete genome | blastn | 334 | 252 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter gracilis | ||
| 22698739 | 22698739 | PRJNA1111146_P_NODE_285518_length_189_cov_2.272059_g284380_i0 | PRJNA1111146 | 285518 | 189 | 2.272059 | 4.29419151 | Campylobacter | 194 | Bacteria | Bacteria | 60.2 | 9.69e-5 | NTclustered | gi|1919195970|gb|CP063088.1| | 201 | g284380 | i0 | 97.143 | 1.77777777777778 | 35 | 1 | 19 | 0 | 155 | 189 | 1268988 | 1268954 | Campylobacter lari strain 2014D-0218 chromosome, complete genome | blastn | 336 | 60.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 23168796 | 23168796 | PRJNA1111146_P_NODE_340999_length_183_cov_0.869231_g339861_i0 | PRJNA1111146 | 340999 | 183 | 0.869231 | 1.59069273 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|1966876394|gb|CP068487.1| | 827 | g339861 | i0 | 100 | 6.10382513661202 | 183 | 0 | 100 | 0 | 1 | 183 | 1214608 | 1214426 | Campylobacter ureolyticus strain FDAARGOS_1102 chromosome | blastn | 1117 | 339 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 23169154 | 23169154 | PRJNA1111146_P_NODE_410439_length_178_cov_1.776000_g409301_i0 | PRJNA1111146 | 410439 | 178 | 1.776 | 3.16128 | Campylobacter concisus | 199 | Bacteria | Bacteria | 313 | 6.259999999999999e-81 | NTclustered | gi|1935893765|gb|CP049234.1| | 199 | g409301 | i0 | 98.315 | 11.9606741573034 | 178 | 3 | 100 | 0 | 1 | 178 | 1023249 | 1023426 | Campylobacter concisus strain P15UCO-S2 chromosome, complete genome | blastn | 2129 | 313 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 24442689 | 24442689 | PRJNA1111146_P_NODE_389060_length_180_cov_0.889764_g387922_i0 | PRJNA1111146 | 389060 | 180 | 0.889764 | 1.6015752 | Campylobacter rectus | 203 | Bacteria | Bacteria | 300 | 4.94e-77 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g387922 | i0 | 96.667 | 2 | 180 | 6 | 100 | 0 | 1 | 180 | 2297467 | 2297646 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 360 | 300 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 24443167 | 24443167 | PRJNA1111146_P_NODE_85040_length_253_cov_0.910000_g83902_i0 | PRJNA1111146 | 85040 | 253 | 0.91 | 2.3023 | Campylobacter concisus | 199 | Bacteria | Bacteria | 396 | 9.209999999999997e-106 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g83902 | i0 | 94.862 | 22.1936758893281 | 253 | 13 | 100 | 0 | 1 | 253 | 184871 | 185123 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 5615 | 396 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26624598 | 26624598 | PRJNA1111146_P_NODE_64621_length_270_cov_1.589862_g63483_i0 | PRJNA1111146 | 64621 | 270 | 1.589862 | 4.2926274 | Helicobacter pylori | 210 | Bacteria | Bacteria | 59.3 | 1.05e-9 | NR | GAA8757316.1 | 210 | g63483 | i0 | 71.4 | 0.8 | 35 | 10 | 38.9 | 0 | 264 | 160 | 5 | 39 | GAA8757316.1 hypothetical protein Kyoto147A_3750 [Helicobacter pylori] | diamond | 216 | 59.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26878229 | 26878229 | PRJNA1111146_P_NODE_307181_length_185_cov_2.636364_g306043_i0 | PRJNA1111146 | 307181 | 185 | 2.636364 | 4.8772734 | Helicobacter pylori | 210 | Bacteria | Bacteria | 73.2 | 2.33e-15 | NR | GAA8854446.1 | 210 | g306043 | i0 | 75.5 | 0.794594594594595 | 49 | 12 | 79.5 | 0 | 10 | 156 | 22 | 70 | GAA8854446.1 hypothetical protein Kyoto154A_1380 [Helicobacter pylori] | diamond | 147 | 73.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26941115 | 26941115 | PRJNA1111146_P_NODE_290002_length_189_cov_1.205882_g288864_i0 | PRJNA1111146 | 290002 | 189 | 1.205882 | 2.27911698 | Helicobacter pylori | 210 | Bacteria | Bacteria | 62.4 | 4.47e-11 | NR | GAA9131729.1 | 210 | g288864 | i0 | 74.4 | 1.23809523809524 | 39 | 8 | 61.9 | 2 | 29 | 145 | 1 | 37 | GAA9131729.1 hypothetical protein Kyoto190A_2250 [Helicobacter pylori] | diamond | 234 | 62.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27320735 | 27320735 | PRJNA1111146_P_NODE_187783_length_209_cov_1.089744_g186645_i0 | PRJNA1111146 | 187783 | 209 | 1.089744 | 2.27756496 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.1 | 3.53e-8 | NR | GAA6859275.1 | 210 | g186645 | i0 | 45.7 | 3.86124401913876 | 70 | 22 | 99 | 3 | 3 | 209 | 1 | 55 | GAA6859275.1 hypothetical protein Kyoto206A_0900 [Helicobacter pylori] | diamond | 807 | 55.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27478578 | 27478578 | PRJNA1111146_P_NODE_101843_length_242_cov_1.560847_g100705_i0 | PRJNA1111146 | 101843 | 242 | 1.560847 | 3.77724974 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 7.72e-6 | NR | GAA8870591.1 | 210 | g100705 | i0 | 62.5 | 0.979338842975207 | 40 | 14 | 48.3 | 1 | 10 | 126 | 6 | 45 | GAA8870591.1 hypothetical protein Kyoto154A_3680 [Helicobacter pylori] | diamond | 237 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27510312 | 27510312 | PRJNA1111146_P_NODE_409743_length_178_cov_1.808000_g408605_i0 | PRJNA1111146 | 409743 | 178 | 1.808 | 3.21824 | Helicobacter pylori | 210 | Bacteria | Bacteria | 69.7 | 2.97e-14 | NR | GAA8812112.1 | 210 | g408605 | i0 | 78 | 0.691011235955056 | 41 | 9 | 69.1 | 0 | 174 | 52 | 6 | 46 | GAA8812112.1 hypothetical protein Kyoto149A_3190 [Helicobacter pylori] | diamond | 123 | 69.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27541791 | 27541791 | PRJNA1111146_P_NODE_21584_length_363_cov_1.532258_g20447_i0 | PRJNA1111146 | 21584 | 363 | 1.532258 | 5.56209654 | Campylobacter concisus | 199 | Bacteria | Bacteria | 45.1 | 0.0233 | NR | MBS6286284.1 | 199 | g20447 | i0 | 35 | 0.495867768595041 | 60 | 38 | 48.8 | 1 | 201 | 25 | 221 | 280 | MBS6286284.1 hypothetical protein [Campylobacter concisus] | diamond | 180 | 45.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 27659476 | 27659476 | PRJNA1111146_P_NODE_106944_length_239_cov_2.935484_g105806_i0 | PRJNA1111146 | 106944 | 239 | 2.935484 | 7.01580676 | Campylobacter | 194 | Bacteria | Bacteria | 56.2 | 4.64e-7 | NR | WP_169940248.1 | 1705724 | g105806 | i0 | 66.7 | 0.903765690376569 | 36 | 12 | 45.2 | 0 | 132 | 239 | 65 | 100 | WP_169940248.1 alpha/beta hydrolase [Campylobacter sp. RM15925] | diamond | 216 | 56.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. RM15925 | ||
| 27826008 | 27826008 | PRJNA1111146_P_NODE_11424_length_461_cov_1.183824_g10295_i0 | PRJNA1111146 | 11424 | 461 | 1.183824 | 5.45742864 | Helicobacter pylori | 210 | Bacteria | Bacteria | 44.7 | 0.00696 | NR | GAA8718463.1 | 210 | g10295 | i0 | 89.5 | 0.123644251626898 | 19 | 2 | 12.4 | 0 | 449 | 393 | 1 | 19 | GAA8718463.1 hypothetical protein Kyoto145A_4490 [Helicobacter pylori] | diamond | 57 | 44.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27857435 | 27857435 | PRJNA1111146_P_NODE_329705_length_183_cov_2.684615_g328567_i0 | PRJNA1111146 | 329705 | 183 | 2.684615 | 4.91284545 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.4 | 5.14e-5 | NR | GAA8871241.1 | 210 | g328567 | i0 | 91.2 | 0.557377049180328 | 34 | 3 | 55.7 | 0 | 133 | 32 | 1 | 34 | GAA8871241.1 hypothetical protein Kyoto154A_3730 [Helicobacter pylori] | diamond | 102 | 47.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27888946 | 27888946 | PRJNA1111146_P_NODE_290185_length_189_cov_1.095588_g289047_i0 | PRJNA1111146 | 290185 | 189 | 1.095588 | 2.07066132 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40 | 0.034 | NR | GAA6820949.1 | 210 | g289047 | i0 | 44.7 | 0.746031746031746 | 47 | 16 | 74.6 | 1 | 141 | 1 | 4 | 40 | GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori] | diamond | 141 | 40 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28101189 | 28101189 | PRJNA1111146_P_NODE_48365_length_290_cov_2.751055_g47228_i0 | PRJNA1111146 | 48365 | 290 | 2.751055 | 7.9780595 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 71.2 | 5.44e-12 | NR | WP_040126338.1 | 196 | g47228 | i0 | 61.7 | 2.23448275862069 | 60 | 22 | 61 | 1 | 60 | 236 | 335 | 394 | WP_040126338.1 type IV secretion system protein VirB10 [Campylobacter fetus] | diamond | 648 | 71.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter fetus | ||
| 28101190 | 28101190 | PRJNA1111146_P_NODE_7845_length_559_cov_4.377470_g6735_i0 | PRJNA1111146 | 7845 | 559 | 4.37747 | 24.4700573 | Bacteria | 2 | Bacteria | Bacteria | 59.7 | 6.73e-8 | NR | MDU9799813.1 | 210 | g6735 | i0 | 86.7 | 0.483005366726297 | 30 | 4 | 16.1 | 0 | 53 | 142 | 8 | 37 | MDU9799813.1 hypothetical protein [Helicobacter pylori] | diamond | 270 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28109963 | 28109963 | PRJNA1111146_P_NODE_386705_length_180_cov_0.889764_g385567_i0 | PRJNA1111146 | 386705 | 180 | 0.889764 | 1.6015752 | Poseidonibacter antarcticus | 2478538 | Bacteria | Bacteria | 72.4 | 1.25e-13 | NR | WP_162984614.1 | 2478538 | g385567 | i0 | 60.3 | 0.966666666666667 | 58 | 23 | 96.7 | 0 | 179 | 6 | 74 | 131 | WP_162984614.1 GAG-pre-integrase domain-containing protein, partial [Poseidonibacter antarcticus] | diamond | 174 | 72.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Poseidonibacter | Poseidonibacter antarcticus | ||
| 28164500 | 28164500 | PRJNA1111146_P_NODE_152425_length_220_cov_1.023952_g151287_i0 | PRJNA1111146 | 152425 | 220 | 1.023952 | 2.2526944 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 94.7 | 6.63e-23 | NR | CAA6822506.1 | 269237 | g151287 | i0 | 66.7 | 13.8545454545455 | 63 | 21 | 85.9 | 0 | 32 | 220 | 25 | 87 | CAA6822506.1 MAG: Rare lipoprotein A precursor [uncultured Sulfurovum sp.] | diamond | 3048 | 95.5 | 0.991623036649215 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | uncultured Sulfurovum sp. | ||
| 28227335 | 28227335 | PRJNA1111146_P_NODE_247806_length_197_cov_1.166667_g246668_i0 | PRJNA1111146 | 247806 | 197 | 1.166667 | 2.29833399 | Bacteria | 2 | Bacteria | Bacteria | 131 | 1.9599999999999997e-37 | NR | ELV3177625.1 | 197 | g246668 | i0 | 96.9 | 4.9492385786802 | 65 | 2 | 99 | 0 | 3 | 197 | 52 | 116 | ELV3177625.1 IS3 family transposase [Campylobacter jejuni] | diamond | 975 | 131 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 28331055 | 28331055 | PRJNA1111146_P_NODE_441706_length_175_cov_2.713115_g440568_i0 | PRJNA1111146 | 441706 | 175 | 2.713115 | 4.74795125 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 1.02e-5 | NR | GAA6912895.1 | 210 | g440568 | i0 | 82.1 | 0.48 | 28 | 5 | 48 | 0 | 9 | 92 | 36 | 63 | GAA6912895.1 hypothetical protein Kyoto207A_3080 [Helicobacter pylori] | diamond | 84 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28457542 | 28457542 | PRJNA1111146_P_NODE_282826_length_190_cov_1.401460_g281688_i0 | PRJNA1111146 | 282826 | 190 | 1.40146 | 2.662774 | Helicobacter pylori | 210 | Bacteria | Bacteria | 65.1 | 1.72e-11 | NR | GAA9038720.1 | 210 | g281688 | i0 | 69.6 | 2.02105263157895 | 46 | 8 | 63.2 | 1 | 172 | 53 | 4 | 49 | GAA9038720.1 hypothetical protein Kyoto184A_01370 [Helicobacter pylori] | diamond | 384 | 65.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28646984 | 28646984 | PRJNA1111146_P_NODE_89647_length_249_cov_2.505102_g88509_i0 | PRJNA1111146 | 89647 | 249 | 2.505102 | 6.23770398 | Helicobacter pylori | 210 | Bacteria | Bacteria | 59.7 | 9.13e-10 | NR | GAA9125269.1 | 210 | g88509 | i0 | 69.4 | 1.71084337349398 | 36 | 10 | 43.4 | 1 | 162 | 55 | 1 | 35 | GAA9125269.1 hypothetical protein Kyoto190A_0810 [Helicobacter pylori] | diamond | 426 | 59.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29026056 | 29026056 | PRJNA1111146_P_NODE_338748_length_183_cov_0.876923_g337610_i0 | PRJNA1111146 | 338748 | 183 | 0.876923 | 1.60476909 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 86.7 | 5.84e-18 | NR | WP_311337355.1 | 827 | g337610 | i0 | 65.6 | 3 | 61 | 16 | 100 | 1 | 183 | 1 | 201 | 256 | WP_311337355.1 YadA-like family protein [Campylobacter ureolyticus] | diamond | 549 | 86.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 29088969 | 29088969 | PRJNA1111146_P_NODE_399008_length_179_cov_0.904762_g397870_i0 | PRJNA1111146 | 399008 | 179 | 0.904762 | 1.61952398 | Helicobacter pylori | 210 | Bacteria | Bacteria | 41.6 | 0.0125 | NR | GAA6955505.1 | 210 | g397870 | i0 | 46.2 | 0.653631284916201 | 39 | 20 | 63.7 | 1 | 23 | 136 | 1 | 39 | GAA6955505.1 hypothetical protein Kyoto211A_1640 [Helicobacter pylori] | diamond | 117 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29152380 | 29152380 | PRJNA1111146_P_NODE_279589_length_190_cov_12.138686_g278451_i0 | PRJNA1111146 | 279589 | 190 | 12.138686 | 23.0635034 | Helicobacter pylori | 210 | Bacteria | Bacteria | 41.6 | 0.0054 | NR | GAA8777965.1 | 210 | g278451 | i0 | 94.4 | 0.284210526315789 | 18 | 1 | 28.4 | 0 | 118 | 171 | 1 | 18 | GAA8777965.1 hypothetical protein BTM122_15620 [Helicobacter pylori] | diamond | 54 | 41.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29278152 | 29278152 | PRJNA1111146_P_NODE_162549_length_216_cov_1.711656_g161411_i0 | PRJNA1111146 | 162549 | 216 | 1.711656 | 3.69717696 | Campylobacter sp. 2 | 205 | Bacteria | Bacteria | 92.8 | 5.2e-22 | NR | WP_214120692.1 | 2836735 | g161411 | i0 | 73.5 | 1.76388888888889 | 68 | 6 | 77.8 | 1 | 212 | 45 | 40 | 107 | WP_214120692.1 hypothetical protein, partial [Campylobacter sp. 2018MI01] | diamond | 381 | 92.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. 2018MI01 | ||
| 29467433 | 29467433 | PRJNA1111146_P_NODE_401710_length_179_cov_0.904762_g400572_i0 | PRJNA1111146 | 401710 | 179 | 0.904762 | 1.61952398 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 107 | 3.57e-26 | NR | EOJ1652682.1 | 197 | g400572 | i0 | 83.1 | 0.988826815642458 | 59 | 10 | 98.9 | 0 | 2 | 178 | 44 | 102 | EOJ1652682.1 hypothetical protein [Campylobacter jejuni] | diamond | 177 | 107 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 29593690 | 29593690 | PRJNA1111146_P_NODE_39130_length_307_cov_1.031496_g37993_i0 | PRJNA1111146 | 39130 | 307 | 1.031496 | 3.16669272 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.0151 | NR | GAA8930966.1 | 210 | g37993 | i0 | 39 | 0.576547231270358 | 59 | 11 | 47.9 | 2 | 204 | 58 | 2 | 45 | GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori] | diamond | 177 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29720090 | 29720090 | PRJNA1111146_P_NODE_11250_length_464_cov_0.946472_g10121_i0 | PRJNA1111146 | 11250 | 464 | 0.946472 | 4.39163008 | Helicobacter pylori | 210 | Bacteria | Bacteria | 49.3 | 5.69e-5 | NR | GAA8955046.1 | 210 | g10121 | i0 | 65.9 | 0.523706896551724 | 41 | 11 | 24.6 | 2 | 338 | 451 | 2 | 42 | GAA8955046.1 hypothetical protein Kyoto181A_2800 [Helicobacter pylori] | diamond | 243 | 49.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29973040 | 29973040 | PRJNA1111146_P_NODE_437191_length_177_cov_0.911290_g436053_i0 | PRJNA1111146 | 437191 | 177 | 0.91129 | 1.6129833 | Campylobacter | 194 | Bacteria | Bacteria | 84.7 | 5.47e-20 | NR | WP_025803834.1 | 194 | g436053 | i0 | 100 | 0.796610169491525 | 47 | 0 | 79.7 | 0 | 35 | 175 | 1 | 47 | WP_025803834.1 MULTISPECIES: hypothetical protein [Campylobacter] | diamond | 141 | 84.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 30532909 | 30532909 | PRJNA1111146_P_NODE_172293_length_213_cov_1.131250_g171155_i0 | PRJNA1111146 | 172293 | 213 | 1.13125 | 2.4095625 | root | 1 | Root_unresolved | Root_unresolved | 104 | 4.71e-26 | NR | WP_265610816.1 | 197 | g171155 | i0 | 77.1 | 172.225352112676 | 70 | 16 | 98.6 | 0 | 2 | 211 | 11 | 80 | WP_265610816.1 class A beta-lactamase, partial [Campylobacter jejuni] | diamond | 36684 | 104 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 31354671 | 31354671 | PRJNA1111146_P_NODE_145336_length_223_cov_0.800000_g144198_i0 | PRJNA1111146 | 145336 | 223 | 0.8 | 1.784 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.7 | 6.44e-12 | NR | GAA6859275.1 | 210 | g144198 | i0 | 48.6 | 2.01793721973094 | 70 | 20 | 94.2 | 1 | 221 | 12 | 6 | 59 | GAA6859275.1 hypothetical protein Kyoto206A_0900 [Helicobacter pylori] | diamond | 450 | 65.1 | 0.993855606758833 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31616407 | 31616407 | PRJNA1111146_P_NODE_408396_length_178_cov_2.288000_g407258_i0 | PRJNA1111146 | 408396 | 178 | 2.288 | 4.07264 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.9 | 1.69e-7 | NR | GAA6912895.1 | 210 | g407258 | i0 | 73.2 | 0.691011235955056 | 41 | 11 | 69.1 | 0 | 2 | 124 | 2 | 42 | GAA6912895.1 hypothetical protein Kyoto207A_3080 [Helicobacter pylori] | diamond | 123 | 53.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31774465 | 31774465 | PRJNA1111146_P_NODE_41197_length_303_cov_0.772000_g40060_i0 | PRJNA1111146 | 41197 | 303 | 0.772 | 2.33916 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 8.72e-5 | NR | GAA9130370.1 | 210 | g40060 | i0 | 87.5 | 0.514851485148515 | 24 | 3 | 23.8 | 0 | 301 | 230 | 13 | 36 | GAA9130370.1 hypothetical protein Kyoto190A_1980 [Helicobacter pylori] | diamond | 156 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31806228 | 31806228 | PRJNA1111146_P_NODE_441817_length_175_cov_2.508197_g440679_i0 | PRJNA1111146 | 441817 | 175 | 2.508197 | 4.38934475 | Helicobacter pylori | 210 | Bacteria | Bacteria | 39.7 | 0.0227 | NR | GAA9196539.1 | 210 | g440679 | i0 | 60 | 0.514285714285714 | 30 | 11 | 49.7 | 1 | 44 | 130 | 3 | 32 | GAA9196539.1 hypothetical protein Kyoto193A_4290 [Helicobacter pylori] | diamond | 90 | 39.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31901112 | 31901112 | PRJNA1111146_P_NODE_436917_length_177_cov_0.911290_g435779_i0 | PRJNA1111146 | 436917 | 177 | 0.91129 | 1.6129833 | Helicobacter pylori | 210 | Bacteria | Bacteria | 111 | 8.28e-27 | NR | GAA8852321.1 | 210 | g435779 | i0 | 84.2 | 0.966101694915254 | 57 | 9 | 96.6 | 0 | 5 | 175 | 1083 | 1139 | GAA8852321.1 hypothetical protein DUHN55_40530 [Helicobacter pylori] | diamond | 171 | 111 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32090982 | 32090982 | PRJNA1111146_P_NODE_310398_length_185_cov_1.416667_g309260_i0 | PRJNA1111146 | 310398 | 185 | 1.416667 | 2.62083395 | uncultured Campylobacter sp. | 218934 | Bacteria | Bacteria | 116 | 1.78e-30 | NR | WP_297965759.1 | 218934 | g309260 | i0 | 93.4 | 0.989189189189189 | 61 | 4 | 98.9 | 0 | 1 | 183 | 62 | 122 | WP_297965759.1 hypothetical protein [uncultured Campylobacter sp.] | diamond | 183 | 116 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | uncultured Campylobacter sp. | ||
| 32344319 | 32344319 | PRJNA1111146_P_NODE_138079_length_225_cov_2.313953_g136941_i0 | PRJNA1111146 | 138079 | 225 | 2.313953 | 5.20639425 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.3 | 7.01e-8 | NR | GAA9176259.1 | 210 | g136941 | i0 | 53.1 | 0.653333333333333 | 49 | 22 | 64 | 1 | 214 | 71 | 1 | 49 | GAA9176259.1 hypothetical protein Kyoto193A_0410 [Helicobacter pylori] | diamond | 147 | 54.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32691396 | 32691396 | PRJNA1111146_P_NODE_329560_length_183_cov_8.284615_g328422_i0 | PRJNA1111146 | 329560 | 183 | 8.284615 | 15.16084545 | Helicobacter pylori | 210 | Bacteria | Bacteria | 57.4 | 4.89e-9 | NR | GAA6858871.1 | 210 | g328422 | i0 | 92.9 | 0.459016393442623 | 28 | 2 | 45.9 | 0 | 98 | 181 | 4 | 31 | GAA6858871.1 hypothetical protein Kyoto206A_0470 [Helicobacter pylori] | diamond | 84 | 57.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848895 | 32848895 | PRJNA1111146_P_NODE_27940_length_336_cov_1.081272_g26803_i0 | PRJNA1111146 | 27940 | 336 | 1.081272 | 3.63307392 | Helicobacter pylori | 210 | Bacteria | Bacteria | 108 | 2.18e-28 | NR | WP_316479284.1 | 210 | g26803 | i0 | 94.3 | 0.473214285714286 | 53 | 3 | 47.3 | 0 | 243 | 85 | 15 | 67 | WP_316479284.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 159 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848915 | 32848915 | PRJNA1111146_P_NODE_397760_length_179_cov_1.182540_g396622_i0 | PRJNA1111146 | 397760 | 179 | 1.18254 | 2.1167466 | Helicobacter pylori | 210 | Bacteria | Bacteria | 75.1 | 3.71e-16 | NR | GAA8854446.1 | 210 | g396622 | i0 | 78.7 | 0.787709497206704 | 47 | 10 | 78.8 | 0 | 25 | 165 | 24 | 70 | GAA8854446.1 hypothetical protein Kyoto154A_1380 [Helicobacter pylori] | diamond | 141 | 75.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32848928 | 32848928 | PRJNA1111146_P_NODE_77600_length_258_cov_1.819512_g76462_i0 | PRJNA1111146 | 77600 | 258 | 1.819512 | 4.69434096 | Helicobacter pylori | 210 | Bacteria | Bacteria | 50.4 | 2.51e-5 | NR | GAA8950287.1 | 210 | g76462 | i0 | 91.7 | 0.63953488372093 | 24 | 2 | 27.9 | 0 | 254 | 183 | 1 | 24 | GAA8950287.1 hypothetical protein Kyoto181A_1460 [Helicobacter pylori] | diamond | 165 | 50.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;