RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111146", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1111146 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26687912 26687912 PRJNA1111146_P_NODE_223001_length_202_cov_1.127517_g221863_i0 PRJNA1111146 223001 202 1.127517 2.27758434 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 98.2 1.26e-23   NR KAI9179615.1 1313167 g221863 i0 71.2 1.96039603960396 66 19 98 0 2 199 61 126 KAI9179615.1 rho GDP dissociation inhibitor [Blastocladiella emersonii ATCC 22665] diamond 396 98.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
31774447 31774447 PRJNA1111146_P_NODE_282197_length_190_cov_1.627737_g281059_i0 PRJNA1111146 282197 190 1.627737 3.0927003 Paraphysoderma sedebokerense 1500003 Fungi Fungi 44.7 0.00395   NR KAI9138813.1 1500003 g281059 i0 50 0.6 38 18 60 1 132 19 351 387 KAI9138813.1 chloride channel [Paraphysoderma sedebokerense] diamond 114 44.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;