RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111146", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1111146 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29751658 29751658 PRJNA1111146_P_NODE_192051_length_208_cov_1.180645_g190913_i0 PRJNA1111146 192051 208 1.180645 2.4557416 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.7 0.024   NR MBD3274186.1 2026760 g190913 i0 39.2 0.735576923076923 51 26 73.6 1 193 41 463 508 MBD3274186.1 hypothetical protein [Fidelibacterota bacterium] diamond 153 42.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32817450 32817450 PRJNA1111146_P_NODE_53400_length_283_cov_1.786957_g52263_i0 PRJNA1111146 53400 283 1.786957 5.05708831 Fidelibacterota bacterium 2026760 Bacteria Bacteria 104 2.98e-24   NR RKY54643.1 2026760 g52263 i0 80.7 2.21554770318021 57 11 60.4 0 283 113 240 296 RKY54643.1 MAG: bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Fidelibacterota bacterium] diamond 627 104 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;