RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111146", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1111146 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28804492 28804492 PRJNA1111146_P_NODE_431548_length_177_cov_0.919355_g430410_i0 PRJNA1111146 431548 177 0.919355 1.62725835 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 84.3 1.64e-17   NR HLP45636.1 2447898 g430410 i0 62.7 2 59 21 98.3 1 175 2 107 165 HLP45636.1 RNA-binding domain-containing protein [Candidatus Kapaibacterium sp.] diamond 354 84.3 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31553408 31553408 PRJNA1111146_P_NODE_324276_length_184_cov_0.870229_g323138_i0 PRJNA1111146 324276 184 0.870229 1.60122136 Candidatus Kapaibacterium thiocyanatum 1895771 Bacteria Bacteria 47.4 1.54e-4   NR MBN9400467.1 1895771 g323138 i0 100 0.326086956521739 20 0 32.6 0 182 123 129 148 MBN9400467.1 hypothetical protein [Candidatus Kapaibacterium thiocyanatum] diamond 60 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium thiocyanatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;