RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111146", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1111146 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18068168 18068168 PRJNA1111146_P_NODE_353395_length_182_cov_0.883721_g352257_i0 PRJNA1111146 353395 182 0.883721 1.60837222 Gracilimonas sp. 1974203 Bacteria Bacteria 62.8 1.4e-9   NR MEX0724066.1 1974203 g352257 i0 46.4 1.84615384615385 56 30 92.3 0 169 2 90 145 MEX0724066.1 DUF5916 domain-containing protein [Gracilimonas sp.] diamond 336 62.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas sp.
29057430 29057430 PRJNA1111146_P_NODE_427928_length_177_cov_1.387097_g426790_i0 PRJNA1111146 427928 177 1.387097 2.45516169 Fodinibius sp. 1872440 Bacteria Bacteria 59.3 1.97e-8   NR MDZ7680189.1 1872440 g426790 i0 54.5 0.932203389830508 55 24 93.2 1 10 174 84 137 MDZ7680189.1 Ig-like domain-containing protein [Fodinibius sp.] diamond 165 59.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;