RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1111146", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA1111146 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12970132 12970132 PRJNA1111146_P_NODE_29911_length_329_cov_2.264493_g28774_i0 PRJNA1111146 29911 329 2.264493 7.45018197 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 66.2 5.35e-10   NR HEY9876024.1 2364082 g28774 i0 59.2 0.446808510638298 49 20 44.7 0 182 328 1 49 HEY9876024.1 competence protein CoiA family protein [Candidatus Obscuribacterales bacterium] diamond 147 66.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
15518343 15518343 PRJNA1111146_P_NODE_15853_length_404_cov_1.774929_g14719_i0 PRJNA1111146 15853 404 1.774929 7.17071316 Bacillati 1783272 Bacteria Bacteria 123 2.74e-30   NR HEY9876024.1 2364082 g14719 i0 49.2 1.9752475247524801 132 64 97.3 2 396 4 133 262 HEY9876024.1 competence protein CoiA family protein [Candidatus Obscuribacterales bacterium] diamond 798 123 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28615338 28615338 PRJNA1111146_P_NODE_254547_length_195_cov_1.859155_g253409_i0 PRJNA1111146 254547 195 1.859155 3.62535225 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 58.5 1.55e-8   NR HEY9872480.1 2364082 g253409 i0 81.1 0.569230769230769 37 7 56.9 0 111 1 32 68 HEY9872480.1 chorismate mutase [Candidatus Obscuribacterales bacterium] diamond 111 58.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31679528 31679528 PRJNA1111146_P_NODE_185657_length_209_cov_1.461538_g184519_i0 PRJNA1111146 185657 209 1.461538 3.05461442 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 108 2.66e-28   NR HEY9875585.1 2364082 g184519 i0 72.5 2.97129186602871 69 19 99 0 1 207 17 85 HEY9875585.1 anti-sigma regulatory factor [Candidatus Obscuribacterales bacterium] diamond 621 108 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;