RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111146", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1111146 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4043556 4043556 PRJNA1111146_P_NODE_399364_length_179_cov_0.904762_g398226_i0 PRJNA1111146 399364 179 0.904762 1.61952398 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 78.2 5e-15   NR HEY2775962.1 2838779 g398226 i0 71.2 0.988826815642458 59 16 97.2 1 2 175 406 464 HEY2775962.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Candidatus Binatia bacterium] diamond 177 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29120692 29120692 PRJNA1111146_P_NODE_422769_length_178_cov_0.896000_g421631_i0 PRJNA1111146 422769 178 0.896 1.59488 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 65.5 9.36e-11   NR HYV31015.1 2838779 g421631 i0 67.4 0.72471910112359506 43 14 72.5 0 2 130 221 263 HYV31015.1 tetratricopeptide repeat protein [Candidatus Binatia bacterium] diamond 129 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;