RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111082" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111082 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9143016 9143016 PRJNA1111082_P_NODE_5328_length_343_cov_1.155556_g5283_i0 PRJNA1111082 5328 343 1.155556 3.96355708 Brachionus plicatilis 10195 Rotifera other_Eukaryota 225 4.8e-66   NR RNA17792.1 10195 g5283 i0 96.5 1.99416909620991 114 4 99.7 0 2 343 848 961 RNA17792.1 coatomer subunit beta [Brachionus plicatilis] diamond 684 225 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29625147 29625147 PRJNA1111082_P_NODE_7310_length_299_cov_1.247788_g7265_i0 PRJNA1111082 7310 299 1.247788 3.73088612 Adineta vaga 104782 Rotifera other_Eukaryota 43.1 0.0472   NR UJR23850.1 104782 g7265 i0 32.9 0.792642140468227 79 53 79.3 0 31 267 11 89 UJR23850.1 hypothetical protein I4U23_026825 [Adineta vaga] diamond 237 43.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;