RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1111082" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111082 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27225656 27225656 PRJNA1111082_P_NODE_8803_length_274_cov_1.388060_g8758_i0 PRJNA1111082 8803 274 1.38806 3.8032844 Chlamydiota bacterium 2081524 Bacteria Bacteria 138 7.22e-37   NR MCH9632404.1 2081524 g8758 i0 77.9 0.941605839416058 86 19 94.2 0 1 258 177 262 MCH9632404.1 Tyrosine-specific transport protein [Chlamydiota bacterium] diamond 258 138 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29373059 29373059 PRJNA1111082_P_NODE_11209_length_249_cov_0.886364_g11164_i0 PRJNA1111082 11209 249 0.886364 2.20704636 Chlamydiota bacterium 2081524 Bacteria Bacteria 55.1 1.83e-6   NR MCH9633112.1 2081524 g11164 i0 46.8 0.927710843373494 77 37 92.8 3 1 231 178 250 MCH9633112.1 hypothetical protein [Chlamydiota bacterium] diamond 231 55.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31331664 31331664 PRJNA1111082_P_NODE_7956_length_287_cov_1.457944_g7911_i0 PRJNA1111082 7956 287 1.457944 4.18429928 Chlamydiota bacterium 2081524 Bacteria Bacteria 102 3.08e-25   NR MBM3201304.1 2081524 g7911 i0 77.6 0.606271777003484 58 13 60.6 0 287 114 91 148 MBM3201304.1 hypothetical protein [Chlamydiota bacterium] diamond 174 102 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32723028 32723028 PRJNA1111082_P_NODE_4580_length_367_cov_1.357143_g4535_i0 PRJNA1111082 4580 367 1.357143 4.98071481 Chlamydiales bacterium 2047757 Bacteria Bacteria 176 2.93e-49   NR HSW72141.1 2047757 g4535 i0 75.5 3.33514986376022 102 25 83.4 0 365 60 427 528 HSW72141.1 prolyl oligopeptidase family serine peptidase [Chlamydiales bacterium] diamond 1224 176 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;