RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1111082" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1111082 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27920539 27920539 PRJNA1111082_P_NODE_7905_length_288_cov_1.372093_g7860_i0 PRJNA1111082 7905 288 1.372093 3.95162784 Candidatus Hydrogenedentes bacterium ADurb.Bin179 1852849 Bacteria Bacteria 63.5 3.19e-9   NR OQB41967.1 1852849 g7860 i0 50 0.6875 66 28 63.5 1 189 7 200 265 OQB41967.1 MAG: hypothetical protein BWY09_00508 [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 198 63.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;