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contig_metadata

33 rows where bioproject = "PRJNA1111082" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA1111082 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1021211 1021211 PRJNA1111082_P_NODE_3681_length_403_cov_1.569697_g3636_i0 PRJNA1111082 3681 403 1.569697 6.32587891 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 745 0   NTclustered gi|323690576|gb|GU935635.1| 88167 g3636 i0 100 100.096774193548 403 0 100 0 1 403 1327 1729 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 40339 745 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
1490008 1490008 PRJNA1111082_P_NODE_2702_length_462_cov_1.326478_g2657_i0 PRJNA1111082 2702 462 1.326478 6.12832836 Globisporangium ultimum 2052682 SAR_Eukaryotes SAR_Eukaryotes 110 2.62e-19   NTclustered gi|299830435|ref|NC_014280.1| 2052682 g2657 i0 76.526 28.3484848484848 213 42 45 5 97 305 16031 16239 Pythium ultimum mitochondrion, complete genome blastn 13097 110 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium ultimum
3571860 3571860 PRJNA1111082_P_NODE_83_length_1499_cov_5.345021_g71_i0 PRJNA1111082 83 1499 5.345021 80.12186479 Blastocystis 12967 SAR_Eukaryotes SAR_Eukaryotes 248 1.83e-60   NTclustered gi|156617365|gb|EF494738.1| 463135 g71 i0 76.827 31.2675116744496 479 87 31 18 716 1180 4252 3784 Blastocystis sp. BT-1 tRNA-Asn, tRNA-Leu, tRNA-Met, and tRNA-Asp genes, complete sequence; NADH dehydrogenase subunit 3 (nad3) gene, complete cds; tRNA-Met and tRNA-Pro genes, complete sequence; NADH dehydrogenase subunit 6 (nad6) gene, complete cds; small subunit ribosomal RNA and tRNA-Met genes, complete sequence; and large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 46870 248 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis sp. BT-1
7868022 7868022 PRJNA1111082_P_NODE_12847_length_236_cov_2.355828_g12802_i0 PRJNA1111082 12847 236 2.355828 5.55975408 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 87.9 5.8e-13   NTclustered gi|145515744|ref|XM_001443735.1| 5888 g12802 i0 100 0.199152542372881 47 0 20 0 161 207 674 628 Paramecium tetraurelia uncharacterized protein (GSPATT00011949001), partial mRNA blastn 47 87.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
7868124 7868124 PRJNA1111082_P_NODE_4847_length_357_cov_13.845070_g4802_i0 PRJNA1111082 4847 357 13.84507 49.4268999 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 73.1 2.59e-8   NTclustered gi|893150443|dbj|AB996604.1| 1561963 g4802 i0 80.18 14.9159663865546 111 10 30 11 250 357 766 867 Amorphochlora amoebiformis nucleomorph DNA, chromosome: 3, complete sequence, strain: CCMP2058 blastn 5325 73.1 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
11694132 11694132 PRJNA1111082_P_NODE_9050_length_270_cov_1.761421_g9005_i0 PRJNA1111082 9050 270 1.761421 4.7558367 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 84.7 8.83e-17   NR CAI2381562.1 5936 g9005 i0 48.8 3.87777777777778 86 44 95.6 0 5 262 90 175 CAI2381562.1 unnamed protein product [Moneuplotes crassus] diamond 1047 84.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
14244134 14244134 PRJNA1111082_P_NODE_1872_length_535_cov_12.852814_g1827_i0 PRJNA1111082 1872 535 12.852814 68.7625549 Hematodinium sp. 173654 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.004   NTclustered gi|357196844|emb|HE610736.1| 173654 g1827 i0 100 0.0560747663551402 30 0 6 0 506 535 31 2 Hematodinium sp. mitochondrial partial small subunit ribosomal RNA (ssu rRNA gene), clone 16 blastn 30 56.5 1 Eukaryota Sar     Dinophyceae Syndiniales Syndiniaceae Hematodinium Hematodinium sp.
14244310 14244310 PRJNA1111082_P_NODE_8192_length_283_cov_1.523810_g8147_i0 PRJNA1111082 8192 283 1.52381 4.3123823 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 523 4.5999999999999983e-144   NTclustered gi|10782|emb|X54004.1| 5908 g8147 i0 100 84.9010600706714 283 0 100 0 1 283 1924 1642 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 24027 523 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
15518084 15518084 PRJNA1111082_P_NODE_8573_length_277_cov_2.161765_g8528_i0 PRJNA1111082 8573 277 2.161765 5.98808905 Poterioochromonas malhamensis 88167 SAR_Eukaryotes SAR_Eukaryotes 403 6.11e-108   NTclustered gi|2088238071|ref|NC_056910.1| 88167 g8528 i0 100 55.5379061371841 218 0 100 0 60 277 16014 15797 Poterioochromonas malhamensis strain SZCZR2049 plastid, complete genome blastn 15384 403 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
20147632 20147632 PRJNA1111082_P_NODE_7376_length_297_cov_2.285714_g7331_i0 PRJNA1111082 7376 297 2.285714 6.78857058 root 1 Root_unresolved Root_unresolved 521 1.7499999999999996e-143   NTclustered gi|10782|emb|X54004.1| 5908 g7331 i0 98.322 61.9225589225589 298 4 100 1 1 297 2736 2439 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 18391 521 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
20616463 20616463 PRJNA1111082_P_NODE_237_length_1095_cov_3.184932_g211_i0 PRJNA1111082 237 1095 3.184932 34.8750054 Guinardia delicatula 1244696 SAR_Eukaryotes SAR_Eukaryotes 244 1.7100000000000004e-59   NTclustered gi|2074156200|gb|MW413905.1| 216802 g211 i0 72.698 40.6283105022831 945 180 82 51 106 1003 23689 24602 Guinardia delicatula mitochondrion, complete genome blastn 44488 244 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia delicatula
21892235 21892235 PRJNA1111082_P_NODE_678_length_777_cov_22.312500_g636_i0 PRJNA1111082 678 777 22.3125 173.368125 Diplophrys sp. ATCC_50360 138669 SAR_Eukaryotes SAR_Eukaryotes 1363 0   NTclustered gi|10732805|gb|AF304465.1|AF304465 138669 g636 i0 98.335 49.1570141570142 781 6 100 4 1 777 1505 728 Diplophrys sp. ATCC_50360 small subunit ribosomal RNA gene, complete sequence blastn 38195 1363 1 Eukaryota Sar     Bigyra Amphitremida   Diplophrys Diplophrys sp. ATCC_50360
24441115 24441115 PRJNA1111082_P_NODE_10120_length_255_cov_2.142857_g10075_i0 PRJNA1111082 10120 255 2.142857 5.46428535 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 472 1.5e-128   NTclustered gi|11466252|ref|NC_000862.1| 5908 g10075 i0 100 19.7960784313725 255 0 100 0 1 255 2036 2290 Tetrahymena pyriformis mitochondrion, complete genome blastn 5048 472 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
27162384 27162384 PRJNA1111082_P_NODE_10422_length_253_cov_0.866667_g10377_i0 PRJNA1111082 10422 253 0.866667 2.19266751 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 48.9 2.85e-4   NR CDW86887.1 5949 g10377 i0 76.9 0.308300395256917 26 6 30.8 0 24 101 424 449 CDW86887.1 UNKNOWN [Stylonychia lemnae] diamond 78 48.9 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27731477 27731477 PRJNA1111082_P_NODE_11044_length_250_cov_0.881356_g10999_i0 PRJNA1111082 11044 250 0.881356 2.20339 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.98e-4   NR CDW88287.1 5949 g10999 i0 74.1 0.324 27 7 32.4 0 183 103 364 390 CDW88287.1 major facilitator superfamily domain-containing protein 1 [Stylonychia lemnae] diamond 81 49.3 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28741532 28741532 PRJNA1111082_P_NODE_10067_length_256_cov_1.442623_g10022_i0 PRJNA1111082 10067 256 1.442623 3.69311488 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 84.3 1.57e-18   NR KAL3939949.1 3061772 g10022 i0 72.2 3.10546875 54 15 63.3 0 1 162 80 133 KAL3939949.1 MAG: hypothetical protein SGBAC_005406, partial [Bacillariaceae sp.] diamond 795 84.3 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
28772992 28772992 PRJNA1111082_P_NODE_10087_length_256_cov_1.218579_g10042_i0 PRJNA1111082 10087 256 1.218579 3.11956224 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 55.8 1.1e-6   NR CDW85435.1 5949 g10042 i0 33.3 0.984375 84 54 96.1 1 250 5 18 101 CDW85435.1 gamma-tubulin complex component 5 [Stylonychia lemnae] diamond 252 55.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28836176 28836176 PRJNA1111082_P_NODE_12708_length_242_cov_0.905325_g12663_i0 PRJNA1111082 12708 242 0.905325 2.1908865 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 78.6 8.88e-15   NR CDW75826.1 5949 g12663 i0 41 0.966942148760331 78 46 96.7 0 234 1 71 148 CDW75826.1 UNKNOWN [Stylonychia lemnae] diamond 234 78.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29467404 29467404 PRJNA1111082_P_NODE_9330_length_266_cov_1.626943_g9285_i0 PRJNA1111082 9330 266 1.626943 4.32766838 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0353   NR CDW77453.1 5949 g9285 i0 86.4 0.24812030075188 22 2 24.8 1 196 131 269 289 CDW77453.1 UNKNOWN [Stylonychia lemnae] diamond 66 43.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30099224 30099224 PRJNA1111082_P_NODE_7752_length_290_cov_2.317972_g7707_i0 PRJNA1111082 7752 290 2.317972 6.7221188 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 119 1.13e-28   NR CDW90083.1 5949 g7707 i0 79.5 0.755172413793103 73 14 75.5 1 242 24 990 1061 CDW90083.1 lysosomal alpha-glucosidase precursor [Stylonychia lemnae] diamond 219 119 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30162331 30162331 PRJNA1111082_P_NODE_11912_length_245_cov_1.755814_g11867_i0 PRJNA1111082 11912 245 1.755814 4.3017443 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 174 3.0699999999999997e-48   NR KAI2510964.1 210448 g11867 i0 97.5 0.991836734693878 81 2 99.2 0 1 243 91 171 KAI2510964.1 Reverse transcriptase (RNA-dependent DNA polymerase) [Fragilaria crotonensis] diamond 243 174 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
30447091 30447091 PRJNA1111082_P_NODE_12313_length_243_cov_2.011765_g12268_i0 PRJNA1111082 12313 243 2.011765 4.88858895 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00166   NR CDW88387.1 5949 g12268 i0 87 0.283950617283951 23 3 28.4 0 111 43 1 23 CDW88387.1 UNKNOWN [Stylonychia lemnae] diamond 69 46.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30501374 30501374 PRJNA1111082_P_NODE_3733_length_400_cov_2.886850_g3688_i0 PRJNA1111082 3733 400 2.88685 11.5474 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 175 1.7e-52   NR XP_009038551.1 44056 g3688 i0 72.7 6.645 128 35 96 0 2 385 96 223 XP_009038551.1 hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens] diamond 2658 175 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
30541687 30541687 PRJNA1111082_P_NODE_1653_length_559_cov_6.524691_g1608_i0 PRJNA1111082 1653 559 6.524691 36.47302269 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 107 4.01e-24   NR KAJ1386766.1 483371 g1608 i0 63.4 0.440071556350626 82 30 44 0 24 269 82 163 KAJ1386766.1 Calycin-like protein, partial [Ochromonadaceae sp. CCMP2298] diamond 246 107 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
30857576 30857576 PRJNA1111082_P_NODE_5754_length_330_cov_2.338521_g5709_i0 PRJNA1111082 5754 330 2.338521 7.7171193 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 90.1 2.64e-18   NR CDW90083.1 5949 g5709 i0 70.5 0.554545454545455 61 18 55.5 0 228 46 869 929 CDW90083.1 lysosomal alpha-glucosidase precursor [Stylonychia lemnae] diamond 183 90.1 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31047527 31047527 PRJNA1111082_P_NODE_9715_length_261_cov_1.526596_g9670_i0 PRJNA1111082 9715 261 1.526596 3.98441556 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 87 8.39e-18   NR CDW86109.1 5949 g9670 i0 87.2 0.540229885057471 47 6 54 0 261 121 140 186 CDW86109.1 UNKNOWN [Stylonychia lemnae] diamond 141 87 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31300090 31300090 PRJNA1111082_P_NODE_6835_length_308_cov_1.489362_g6790_i0 PRJNA1111082 6835 308 1.489362 4.58723496 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00781   NR GLD98074.1 114742 g6790 i0 34.7 2.19155844155844 72 43 70.1 1 254 39 45 112 GLD98074.1 hypothetical protein PINS_up006771 [Pythium insidiosum] diamond 675 43.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31837629 31837629 PRJNA1111082_P_NODE_13057_length_227_cov_2.266234_g13012_i0 PRJNA1111082 13057 227 2.266234 5.14435118 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 78.6 7.13e-15   NR CAG9315140.1 1481888 g13012 i0 56.7 0.885462555066079 67 28 88.5 1 225 25 224 289 CAG9315140.1 unnamed protein product [Blepharisma stoltei] diamond 201 78.6 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
32344308 32344308 PRJNA1111082_P_NODE_10559_length_252_cov_0.871508_g10514_i0 PRJNA1111082 10559 252 0.871508 2.19620016 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 53.1 9.18e-6   NR KAJ1434213.1 483371 g10514 i0 54.9 1.19047619047619 51 21 60.7 1 252 100 487 535 KAJ1434213.1 hypothetical protein B484DRAFT_446770, partial [Ochromonadaceae sp. CCMP2298] diamond 300 53.1 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
32407417 32407417 PRJNA1111082_P_NODE_8419_length_280_cov_1.492754_g8374_i0 PRJNA1111082 8419 280 1.492754 4.1797112 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 153 2.4999999999999993e-43   NR CDW71539.1 5949 g8374 i0 97.2 0.771428571428571 72 2 77.1 0 65 280 28 99 CDW71539.1 lem3 (ligand-effect modulator 3) family protein [Stylonychia lemnae] diamond 216 153 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32439243 32439243 PRJNA1111082_P_NODE_4159_length_383_cov_1.338710_g4114_i0 PRJNA1111082 4159 383 1.33871 5.1272593 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 138 5.069999999999998e-35   NR CDW84722.1 5949 g4114 i0 84.2 0.595300261096606 76 12 59.5 0 308 81 58 133 CDW84722.1 polyphosphoinositide phosphatase [Stylonychia lemnae] diamond 228 138 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32470822 32470822 PRJNA1111082_P_NODE_13039_length_228_cov_2.012903_g12994_i0 PRJNA1111082 13039 228 2.012903 4.5894188400000004 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 124 1.7599999999999998e-31   NR CAI2366548.1 5936 g12994 i0 77.3 0.986842105263158 75 17 98.7 0 1 225 316 390 CAI2366548.1 unnamed protein product [Moneuplotes crassus] diamond 225 124 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
32619733 32619733 PRJNA1111082_P_NODE_6360_length_317_cov_1.586066_g6315_i0 PRJNA1111082 6360 317 1.586066 5.02782922 Symbiodiniaceae 252141 SAR_Eukaryotes SAR_Eukaryotes 48.5 8.5e-4   NR CAE7688521.1 2952 g6315 i0 57.9 1.17350157728707 38 16 36 0 66 179 1150 1187 CAE7688521.1 notch1, partial [Symbiodinium pilosum] diamond 372 48.9 0.991820040899796 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium pilosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;