RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111082", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1111082 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26783130 26783130 PRJNA1111082_P_NODE_8721_length_275_cov_1.544554_g8676_i0 PRJNA1111082 8721 275 1.544554 4.2475235 Ignavibacteria bacterium 2053306 Bacteria Bacteria 54.3 4.52e-6   NR MBK8553814.1 2053306 g8676 i0 36.5 1.85454545454545 85 51 91.6 2 274 23 153 235 MBK8553814.1 metallophosphoesterase [Ignavibacteria bacterium] diamond 510 54.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28078395 28078395 PRJNA1111082_P_NODE_11485_length_247_cov_1.597701_g11440_i0 PRJNA1111082 11485 247 1.597701 3.94632147 Ignavibacteria bacterium 2053306 Bacteria Bacteria 152 7.71e-41   NR MBK7578529.1 2053306 g11440 i0 98.8 1.9919028340081 82 1 99.6 0 247 2 494 575 MBK7578529.1 phage portal protein [Ignavibacteria bacterium] diamond 492 152 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;