RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1111082", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1111082 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19341373 19341373 PRJNA1111082_P_NODE_9056_length_270_cov_1.675127_g9011_i0 PRJNA1111082 9056 270 1.675127 4.5228429 Candidatus Southlakia epibionticum 3043284 Bacteria Bacteria 56.5 0.002   NTclustered gi|2516687873|gb|CP124550.1| 3043284 g9011 i0 100 0.111111111111111 30 0 11 0 227 256 454088 454059 Candidatus Southlakia epibionticum strain ML1 chromosome, complete genome blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Southlakia Candidatus Southlakia epibionticum
27004409 27004409 PRJNA1111082_P_NODE_9162_length_269_cov_1.096939_g9117_i0 PRJNA1111082 9162 269 1.096939 2.95076591 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 43.9 0.00391   NR HEY1646032.1 2973664 g9117 i0 30.6 0.691449814126394 62 43 69.1 0 79 264 5 66 HEY1646032.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 186 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
29869495 29869495 PRJNA1111082_P_NODE_9951_length_257_cov_2.619565_g9906_i0 PRJNA1111082 9951 257 2.619565 6.73228205 Candidatus Saccharimonas 1331051 Bacteria Bacteria 64.3 9.78e-10   NR HPQ82657.1 1917697 g9906 i0 79.4 1.99610894941634 34 7 39.7 0 156 257 1 34 HPQ82657.1 glycosyltransferase family 4 protein [Candidatus Saccharimonas sp.] diamond 513 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32154242 32154242 PRJNA1111082_P_NODE_4358_length_375_cov_1.152318_g4313_i0 PRJNA1111082 4358 375 1.152318 4.3211925 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 112 4.41e-26   NR MCA9312800.1 2026720 g4313 i0 53.4 0.944 118 53 94.4 1 367 14 113 228 MCA9312800.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 354 112 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;