RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1111077", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1111077 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5317226 5317226 PRJNA1111077_P_NODE_11085_length_355_cov_3.588652_g10864_i0 PRJNA1111077 11085 355 3.588652 12.7397146 Ripathuj virus 3131458 Viruses Viruses 414 3.72e-111   NTclustered gi|2717322573|gb|PP173760.1| 3131458 g10864 i0 88.473 147.250704225352 347 34 97 6 12 355 48 391 MAG: Ripathuj virus isolate RCCP2_k141_221326 genomic sequence blastn 52274 414 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripathuj virus
15048708 15048708 PRJNA1111077_P_NODE_14912_length_310_cov_4.341772_g14691_i0 PRJNA1111077 14912 310 4.341772 13.4594932 root 1 Root_unresolved Root_unresolved 228 4.4799999999999984e-55   NTclustered gi|2717322326|gb|PP173666.1| 3131364 g14691 i0 85.366 257.332258064516 205 27 65 3 108 310 789 586 MAG: Ripastyr virus isolate MP3_k141_6580 genomic sequence blastn 79773 228 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripastyr virus
28488981 28488981 PRJNA1111077_P_NODE_19267_length_289_cov_1.907407_g19046_i0 PRJNA1111077 19267 289 1.907407 5.51240623 Escherichia phage BZ13 2789207 Viruses Viruses 154 3.289999999999999e-42   NR ACT66720.1 2789207 g19046 i0 80.2 5.97923875432526 96 18 99.7 1 289 2 212 306 ACT66720.1 replicase [Escherichia phage BZ13] diamond 1728 154 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Emesvirus Emesvirus japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;