RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1111077" and tax_phylum = "Candidatus Levyibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Levyibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1111077 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5317492 5317492 PRJNA1111077_P_NODE_20985_length_283_cov_4.242857_g20764_i0 PRJNA1111077 20985 283 4.242857 12.00728531 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 259 1.43e-64   NTclustered gi|2874253967|emb|OY970292.1| 2052151 g20764 i0 83.746 38.2120141342756 283 36 98 5 6 282 720162 720440 MAG: Candidatus Levybacteria bacterium isolate MFD01916.bin.c.8 genome assembly, chromosome: 1 blastn 10814 259 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
26846519 26846519 PRJNA1111077_P_NODE_37981_length_227_cov_3.902597_g37760_i0 PRJNA1111077 37981 227 3.902597 8.85889519 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 134 2.14e-35   NR MBA3723266.1 2052151 g37760 i0 92 0.991189427312775 75 6 99.1 0 226 2 26 100 MBA3723266.1 cell division protein FtsA [Candidatus Levyibacteriota bacterium] diamond 225 134 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
29878357 29878357 PRJNA1111077_P_NODE_31071_length_250_cov_0.870056_g30850_i0 PRJNA1111077 31071 250 0.870056 2.17514 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 43.9 0.0154   NR MFH1186620.1 2052151 g30850 i0 32.5 2.04 83 55 98.4 1 248 3 362 444 MFH1186620.1 hypothetical protein [Candidatus Levyibacteriota bacterium] diamond 510 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;