RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1111077", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1111077 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6592534 6592534 PRJNA1111077_P_NODE_14146_length_315_cov_1.264463_g13925_i0 PRJNA1111077 14146 315 1.264463 3.98305845 Nematostella vectensis 45351 Cnidaria other_Eukaryota 582 8.459999999999998e-162   NTclustered gi|2257811793|ref|XM_001633797.3| 45351 g13925 i0 100 9.18412698412698 315 0 100 0 1 315 537 223 PREDICTED: Nematostella vectensis 40S ribosomal protein S3a (LOC5513560), mRNA blastn 2893 582 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
28132999 28132999 PRJNA1111077_P_NODE_16965_length_302_cov_2.698690_g16744_i0 PRJNA1111077 16965 302 2.69869 8.1500438 Actiniaria 6103 Cnidaria other_Eukaryota 74.3 1.75e-14   NR XP_031568142.1 6105 g16744 i0 74.5 4.29139072847682 47 12 46.7 0 301 161 59 105 XP_031568142.1 40S ribosomal protein S24-like [Actinia tenebrosa] diamond 1296 74.7 0.994645247657296 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
32303955 32303955 PRJNA1111077_P_NODE_35979_length_242_cov_0.911243_g35758_i0 PRJNA1111077 35979 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 1.88e-7   NR XP_066921379.1 252671 g35758 i0 45.1 18.4214876033058 71 37 85.5 1 32 238 68 138 XP_066921379.1 plasma membrane calcium-transporting ATPase 1-like [Clytia hemisphaerica] diamond 4458 57.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;