contig_metadata
8 rows where bioproject = "PRJNA1111077", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10417979 | 10417979 | PRJNA1111077_P_NODE_17789_length_296_cov_3.385650_g17568_i0 | PRJNA1111077 | 17789 | 296 | 3.38565 | 10.021524 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 110 | 1.61e-19 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g17568 | i0 | 81.481 | 0.550675675675676 | 135 | 23 | 45 | 2 | 1 | 134 | 2118429 | 2118562 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 163 | 110 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 26814718 | 26814718 | PRJNA1111077_P_NODE_26501_length_264_cov_3.361257_g26280_i0 | PRJNA1111077 | 26501 | 264 | 3.361257 | 8.87371848 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 82 | 7.13e-16 | NR | MFQ3678497.1 | 2682144 | g26280 | i0 | 51.1 | 2.97727272727273 | 88 | 42 | 98.9 | 1 | 2 | 262 | 290 | 377 | MFQ3678497.1 cytochrome c biogenesis protein CcsA [Fimbriimonadaceae bacterium] | diamond | 786 | 82 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 27036145 | 27036145 | PRJNA1111077_P_NODE_34122_length_245_cov_0.895349_g33901_i0 | PRJNA1111077 | 34122 | 245 | 0.895349 | 2.19360505 | Chthonomonadaceae bacterium | 2739509 | Bacteria | Bacteria | 139 | 3.07e-36 | NR | MBC7526815.1 | 2739509 | g33901 | i0 | 79 | 4.95918367346939 | 81 | 17 | 99.2 | 0 | 2 | 244 | 159 | 239 | MBC7526815.1 DUF1592 domain-containing protein [Chthonomonadaceae bacterium] | diamond | 1215 | 139 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonadaceae bacterium | |||
| 27162373 | 27162373 | PRJNA1111077_P_NODE_32882_length_247_cov_0.885057_g32661_i0 | PRJNA1111077 | 32882 | 247 | 0.885057 | 2.18609079 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 43.9 | 0.0146 | NR | MCS7193046.1 | 2033014 | g32661 | i0 | 41.9 | 1.50607287449393 | 62 | 21 | 66.8 | 2 | 17 | 181 | 55 | 108 | MCS7193046.1 ABC transporter permease [Armatimonadota bacterium] | diamond | 372 | 43.9 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 27289008 | 27289008 | PRJNA1111077_P_NODE_28683_length_256_cov_1.683060_g28462_i0 | PRJNA1111077 | 28683 | 256 | 1.68306 | 4.3086336 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 117 | 2.33e-28 | NR | HLK15082.1 | 2682144 | g28462 | i0 | 64.3 | 0.984375 | 84 | 30 | 98.4 | 0 | 254 | 3 | 638 | 721 | HLK15082.1 DUF4132 domain-containing protein [Fimbriimonadaceae bacterium] | diamond | 252 | 117 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 27510245 | 27510245 | PRJNA1111077_P_NODE_14983_length_310_cov_4.063291_g14762_i0 | PRJNA1111077 | 14983 | 310 | 4.063291 | 12.5962021 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 54.7 | 5.11e-6 | NR | MFQ6099522.1 | 2033014 | g14762 | i0 | 34.8 | 1.73225806451613 | 92 | 49 | 78.4 | 1 | 249 | 7 | 376 | 467 | MFQ6099522.1 VWA domain-containing protein [Armatimonadota bacterium] | diamond | 537 | 54.7 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 30478596 | 30478596 | PRJNA1111077_P_NODE_11133_length_355_cov_1.365248_g10912_i0 | PRJNA1111077 | 11133 | 355 | 1.365248 | 4.8466304 | Armatimonadetes bacterium RBG_16_58_9 | 1797287 | Bacteria | Bacteria | 55.1 | 5.71e-6 | NR | OFX15666.1 | 1797287 | g10912 | i0 | 62.8 | 0.363380281690141 | 43 | 15 | 35.5 | 1 | 352 | 227 | 62 | 104 | OFX15666.1 MAG: hypothetical protein A2Z18_10935 [Armatimonadetes bacterium RBG_16_58_9] | diamond | 129 | 55.1 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadetes bacterium RBG_16_58_9 | ||||||
| 31923874 | 31923874 | PRJNA1111077_P_NODE_17317_length_298_cov_5.973333_g17096_i0 | PRJNA1111077 | 17317 | 298 | 5.973333 | 17.80053234 | Bacteria | 2 | Bacteria | Bacteria | 61.6 | 1.67e-8 | NR | WP_309718084.1 | 1872638 | g17096 | i0 | 96.9 | 7.22818791946309 | 32 | 1 | 32.2 | 0 | 2 | 97 | 659 | 690 | WP_309718084.1 sodium-translocating pyrophosphatase [Armatimonas sp.] | diamond | 2154 | 61.6 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadia | Armatimonadales | Armatimonadaceae | Armatimonas | Armatimonas sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;