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contig_metadata

17 rows where bioproject = "PRJNA1111077" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 17 ✖

bioproject 1

  • PRJNA1111077 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7867311 7867311 PRJNA1111077_P_NODE_18727_length_291_cov_1.958716_g18506_i0 PRJNA1111077 18727 291 1.958716 5.69986356 Chlamydomonas eustigma 1157962 Plants Plants 160 2.71e-48   NR GAX78121.1 1157962 g18506 i0 79.6 11.5567010309278 93 19 95.9 0 280 2 6 98 GAX78121.1 hypothetical protein CEUSTIGMA_g5563.t1 [Chlamydomonas eustigma] diamond 3363 160 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
7867349 7867349 PRJNA1111077_P_NODE_20367_length_285_cov_5.084906_g20146_i0 PRJNA1111077 20367 285 5.084906 14.4919821 Chlamydomonas reinhardtii 3055 Plants Plants 69.4 2.61e-7   NTclustered gi|2082252490|ref|XM_043064992.1| 3055 g20146 i0 100 0.129824561403509 37 0 13 0 27 63 866 902 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g369200v5), mRNA blastn 37 69.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9142194 9142194 PRJNA1111077_P_NODE_19688_length_288_cov_1.297674_g19467_i0 PRJNA1111077 19688 288 1.297674 3.73730112 Dunaliella salina 3046 Plants Plants 149 1.08e-39   NR KAF5834205.1 3046 g19467 i0 78 5.79166666666667 91 20 94.8 0 6 278 512 602 KAF5834205.1 flagellar associated protein [Dunaliella salina] diamond 1668 149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
11693489 11693489 PRJNA1111077_P_NODE_30670_length_250_cov_1.491525_g30449_i0 PRJNA1111077 30670 250 1.491525 3.7288125 Coccomyxa subellipsoidea 248742 Plants Plants 231 2.7099999999999996e-56   NTclustered gi|545370874|ref|XM_005649985.1| 574566 g30449 i0 86.73 3.928 211 25 83 2 30 237 4180 3970 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 982 231 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
12968390 12968390 PRJNA1111077_P_NODE_18251_length_293_cov_4.027273_g18030_i0 PRJNA1111077 18251 293 4.027273 11.79990989 Chlorella variabilis 554065 Plants Plants 124 5.68e-24   NTclustered gi|552825916|ref|XM_005846855.1| 554065 g18030 i0 84.252 10.1399317406143 127 20 43 0 143 269 223 97 Chlorella variabilis hypothetical protein (CHLNCDRAFT_134811) mRNA, complete cds blastn 2971 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
12968518 12968518 PRJNA1111077_P_NODE_23851_length_274_cov_1.432836_g23630_i0 PRJNA1111077 23851 274 1.432836 3.92597064 Coccomyxa subellipsoidea 248742 Plants Plants 62.1 4.18e-5   NTclustered gi|545365919|ref|XM_005647835.1| 574566 g23630 i0 95 2.15693430656934 40 1 14 1 40 78 408 447 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 591 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
14243679 14243679 PRJNA1111077_P_NODE_30752_length_250_cov_0.870056_g30531_i0 PRJNA1111077 30752 250 0.870056 2.17514 Coccomyxa subellipsoidea 248742 Plants Plants 108 4.76e-19   NTclustered gi|545354088|ref|XM_005642822.1| 574566 g30531 i0 90.244 0.328 82 8 33 0 95 176 1077 1158 Coccomyxa subellipsoidea C-169 aspartate aminotransferase mRNA blastn 82 108 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
16323637 16323637 PRJNA1111077_P_NODE_25313_length_269_cov_1.316327_g25092_i0 PRJNA1111077 25313 269 1.316327 3.54091963 Characiosiphonaceae 167773 Plants Plants 183 8.38e-42   NTclustered gi|15281654|gb|AF395494.1| 167770 g25092 i0 79.487 66.5687732342007 273 45 100 7 1 269 1729 1464 Characiosiphon rivularis strain UTEX LB 1763 26S ribosomal RNA gene, partial sequence blastn 17907 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Characiosiphonaceae Characiosiphon Characiosiphon rivularis
27248662 27248662 PRJNA1111077_P_NODE_33403_length_246_cov_0.890173_g33182_i0 PRJNA1111077 33403 246 0.890173 2.18982558 Chlamydomonadales 3042 Plants Plants 121 1.57e-32   NR KAF5838120.1 3046 g33182 i0 81.3 5.74390243902439 75 14 91.5 0 245 21 107 181 KAF5838120.1 ribosomal protein S9 component of cytosolic 80S ribosome and 40S small subunit [Dunaliella salina] diamond 1413 122 0.991803278688525 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
27478547 27478547 PRJNA1111077_P_NODE_22883_length_277_cov_2.053922_g22662_i0 PRJNA1111077 22883 277 2.053922 5.68936394 Chlamydomonas sp. UWO 241 1653778 Plants Plants 68.9 9.61e-12   NR KAG1673559.1 1653778 g22662 i0 40.5 7.20216606498195 84 49 91 1 15 266 48 130 KAG1673559.1 hypothetical protein FOA52_003859 [Chlamydomonas sp. UWO 241] diamond 1995 68.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
27825993 27825993 PRJNA1111077_P_NODE_7624_length_421_cov_1.770115_g7403_i0 PRJNA1111077 7624 421 1.770115 7.45218415 Picochlorum sp. BPE23 2696299 Plants Plants 141 2.67e-40   NR KAI8104783.1 2696299 g7403 i0 65.6 3.52731591448931 122 42 86.9 0 20 385 1 122 KAI8104783.1 hypothetical protein M9434_003335 [Picochlorum sp. BPE23] diamond 1485 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23
28322272 28322272 PRJNA1111077_P_NODE_33866_length_245_cov_2.145349_g33645_i0 PRJNA1111077 33866 245 2.145349 5.25610505 Eukaryota 2759 Plants Plants 52.8 1.04e-5   NR KXZ45416.1 33097 g33645 i0 57.5 1.11428571428571 40 17 49 0 163 44 254 293 KXZ45416.1 hypothetical protein GPECTOR_55g322 [Gonium pectorale] diamond 273 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
29183759 29183759 PRJNA1111077_P_NODE_9629_length_379_cov_1.405229_g9408_i0 PRJNA1111077 9629 379 1.405229 5.32581791 Prototheca wickerhamii 3111 Plants Plants 124 7.8e-34   NR KAK2076791.1 3111 g9408 i0 70 5.72295514511873 80 24 63.3 0 1 240 29 108 KAK2076791.1 iso-1-cytochrome c [Prototheca wickerhamii] diamond 2169 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29878354 29878354 PRJNA1111077_P_NODE_29071_length_254_cov_3.464088_g28850_i0 PRJNA1111077 29071 254 3.464088 8.79878352 Volvox reticuliferus 1737510 Plants Plants 94.7 4.78e-23   NR GIL72205.1 1737510 g28850 i0 67.6 0.803149606299213 68 22 80.3 0 5 208 37 104 GIL72205.1 hypothetical protein Vretifemale_2583 [Volvox reticuliferus] diamond 204 94.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
30921038 30921038 PRJNA1111077_P_NODE_35514_length_243_cov_0.905882_g35293_i0 PRJNA1111077 35514 243 0.905882 2.20129326 Coccomyxa viridis 1274662 Plants Plants 72 3.76e-13   NR CAL5223714.1 1274662 g35293 i0 71.1 0.469135802469136 38 11 46.9 0 232 119 177 214 CAL5223714.1 g6268 [Coccomyxa viridis] diamond 114 72 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32240599 32240599 PRJNA1111077_P_NODE_30638_length_250_cov_1.683616_g30417_i0 PRJNA1111077 30638 250 1.683616 4.20904 Trebouxiales 2507901 Plants Plants 72 1.74e-12   NR CAK0761244.1 1274662 g30417 i0 42.2 6.984 83 47 98.4 1 250 5 243 325 CAK0761244.1 hypothetical protein CVIRNUC_002841 [Coccomyxa viridis] diamond 1746 72.4 0.994475138121547 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32249482 32249482 PRJNA1111077_P_NODE_29198_length_254_cov_1.668508_g28977_i0 PRJNA1111077 29198 254 1.668508 4.23801032 Monoraphidium neglectum 145388 Plants Plants 48.1 4.13e-4   NR XP_013901345.1 145388 g28977 i0 70 0.708661417322835 30 9 35.4 0 12 101 103 132 XP_013901345.1 gyoxylate/hydroxypyruvate reductase A [Monoraphidium neglectum] diamond 180 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;