RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111077", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28678542 28678542 PRJNA1111077_P_NODE_17547_length_297_cov_6.102679_g17326_i0 PRJNA1111077 17547 297 6.102679 18.12495663 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 63.5 1.9e-9   NR TEB19254.1 2494336 g17326 i0 51.8 0.565656565656566 56 24 55.6 2 245 81 210 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 168 63.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
29625138 29625138 PRJNA1111077_P_NODE_7970_length_413_cov_2.461765_g7749_i0 PRJNA1111077 7970 413 2.461765 10.16708945 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 70.1 2.59e-11   NR TEB19254.1 2494336 g7749 i0 51.3 0.552058111380145 76 34 55.2 2 411 184 191 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 228 70.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;