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contig_metadata

31 rows where bioproject = "PRJNA1111077", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 31 ✖

tax_clade 1

  • Sar · 31 ✖

bioproject 1

  • PRJNA1111077 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
215000 215000 PRJNA1111077_P_NODE_4521_length_533_cov_0.976087_g4300_i0 PRJNA1111077 4521 533 0.976087 5.20254371 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 394 7.55e-105   NTclustered gi|166052859|emb|CU367305.1| 100861 g4300 i0 80.151 24.4596622889306 529 103 99 2 1 528 885 358 Aphanomyces euteiches cDNA blastn 13037 394 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
1021109 1021109 PRJNA1111077_P_NODE_36381_length_241_cov_1.833333_g36160_i0 PRJNA1111077 36381 241 1.833333 4.41833253 root 1 Root_unresolved Root_unresolved 446 8.519999999999999e-121   NTclustered gi|166046524|emb|CU367641.1| 100861 g36160 i0 100 42.9460580912863 241 0 100 0 1 241 158 398 Aphanomyces euteiches cDNA blastn 10350 446 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
2765329 2765329 PRJNA1111077_P_NODE_22383_length_279_cov_1.475728_g22162_i0 PRJNA1111077 22383 279 1.475728 4.11728112 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 215 3.1e-51   NTclustered gi|698802469|ref|XM_009835962.1| 112090 g22162 i0 82.645 56.8637992831541 242 42 87 0 18 259 966 725 Aphanomyces astaci V-type H(+)-translocating pyrophosphatase mRNA blastn 15865 215 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
2765837 2765837 PRJNA1111077_P_NODE_8423_length_403_cov_1.769697_g8202_i0 PRJNA1111077 8423 403 1.769697 7.13187891 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 179 2.2899999999999998e-54   NR XP_024584861.1 4781 g8202 i0 94.5 6.61786600496278 91 5 67.7 0 403 131 92 182 XP_024584861.1 adp-ribosylation factor [Plasmopara halstedii] diamond 2667 179 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
4041708 4041708 PRJNA1111077_P_NODE_32944_length_247_cov_0.885057_g32723_i0 PRJNA1111077 32944 247 0.885057 2.18609079 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 165 1.03e-45   NR RHZ15998.1 112090 g32723 i0 93.9 11.9271255060729 82 5 99.6 0 247 2 468 549 RHZ15998.1 hypothetical protein DYB26_008868 [Aphanomyces astaci] diamond 2946 165 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
8674208 8674208 PRJNA1111077_P_NODE_13927_length_317_cov_2.524590_g13706_i0 PRJNA1111077 13927 317 2.52459 8.0029503 Salisapilia 983658 SAR_Eukaryotes SAR_Eukaryotes 202 2.79e-47   NTclustered gi|1244022750|gb|MF979505.1| 758748 g13706 i0 88.957 52.5520504731861 163 18 51 0 1 163 643 481 Salisapilia elongata strain NBRC 100786 large subunit ribosomal RNA gene, partial sequence blastn 16659 202 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Salisapiliaceae Salisapilia Salisapilia elongata
9142387 9142387 PRJNA1111077_P_NODE_27248_length_262_cov_1.222222_g27027_i0 PRJNA1111077 27248 262 1.222222 3.20222164 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 316 7.679999999999998e-82   NTclustered gi|695393603|ref|XM_009522363.1| 67593 g27027 i0 88.76 99.4427480916031 258 29 98 0 1 258 76 333 Phytophthora sojae hypothetical protein mRNA blastn 26054 316 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
10418080 10418080 PRJNA1111077_P_NODE_22029_length_280_cov_1.487923_g21808_i0 PRJNA1111077 22029 280 1.487923 4.1661844 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 175 6.12e-50   NR DBA03280.1 4803 g21808 i0 90.2 191.110714285714 92 9 98.6 0 3 278 23 114 DBA03280.1 TPA: hypothetical protein N0F65_011639 [Lagenidium giganteum] diamond 53511 176 0.994318181818182 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
11693719 11693719 PRJNA1111077_P_NODE_5770_length_478_cov_1.693827_g5549_i0 PRJNA1111077 5770 478 1.693827 8.09649306 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 396 1.87e-105   NTclustered gi|669151349|ref|XM_008613015.1| 1156394 g5549 i0 81.667 28.8556485355649 480 84 100 3 1 478 1517 1040 Saprolegnia diclina VS20 adenosylhomocysteinase mRNA blastn 13793 396 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
11693838 11693838 PRJNA1111077_P_NODE_9950_length_373_cov_3.566667_g9729_i0 PRJNA1111077 9950 373 3.566667 13.30366791 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 145 1.9e-42   NR TMW58359.1 41045 g9729 i0 65.7 17.0991957104558 108 37 86.9 0 9 332 11 118 TMW58359.1 hypothetical protein Poli38472_009918 [Pythium oligandrum] diamond 6378 145 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
16792102 16792102 PRJNA1111077_P_NODE_36234_length_242_cov_0.911243_g36013_i0 PRJNA1111077 36234 242 0.911243 2.20520806 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 148 2.6999999999999997e-31   NTclustered gi|698781800|ref|XM_009825642.1| 112090 g36013 i0 84.076 0.847107438016529 157 21 64 4 73 227 449 603 Aphanomyces astaci hypothetical protein mRNA blastn 205 148 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
20147505 20147505 PRJNA1111077_P_NODE_30176_length_251_cov_0.865169_g29955_i0 PRJNA1111077 30176 251 0.865169 2.17157419 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 459 1.1499999999999996e-124   NTclustered gi|189084007|gb|BT031523.1| 4784 g29955 i0 99.602 100.01593625498 251 1 100 0 1 251 1884 2134 Phytophthora capsici clone CBOT29-E20 mRNA sequence blastn 25104 459 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
23167005 23167005 PRJNA1111077_P_NODE_23519_length_275_cov_1.524752_g23298_i0 PRJNA1111077 23519 275 1.524752 4.193068 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 150 8.709999999999998e-32   NTclustered gi|695373065|ref|XM_009516665.1| 67593 g23298 i0 77.821 18.9563636363636 257 47 92 10 19 270 699 448 Phytophthora sojae hypothetical protein mRNA blastn 5213 150 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
24440956 24440956 PRJNA1111077_P_NODE_4620_length_528_cov_4.980220_g4399_i0 PRJNA1111077 4620 528 4.98022 26.2955616 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 296 2.17e-75   NTclustered gi|698822976|ref|XM_009846215.1| 112090 g4399 i0 78.243 66.7746212121212 478 92 90 9 48 520 527 57 Aphanomyces astaci 40S ribosomal protein S13 mRNA blastn 35257 296 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
26805813 26805813 PRJNA1111077_P_NODE_23801_length_274_cov_1.532338_g23580_i0 PRJNA1111077 23801 274 1.532338 4.19860612 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 1.59e-33   NR KAK1947371.1 4793 g23580 i0 66.7 23.5620437956204 90 30 98.5 0 3 272 73 162 KAK1947371.1 60S ribosomal protein L23a [Phytophthora citrophthora] diamond 6456 125 0.992 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
26909592 26909592 PRJNA1111077_P_NODE_25162_length_269_cov_2.096939_g24941_i0 PRJNA1111077 25162 269 2.096939 5.64076591 Peronospora destructor 86335 SAR_Eukaryotes SAR_Eukaryotes 162 2.63e-46   NR CAI5742716.1 86335 g24941 i0 88.6 11.7769516728625 88 10 98.1 0 269 6 186 273 CAI5742716.1 unnamed protein product [Peronospora destructor] diamond 3168 162 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora destructor
26963955 26963955 PRJNA1111077_P_NODE_31222_length_249_cov_2.232955_g31001_i0 PRJNA1111077 31222 249 2.232955 5.56005795 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 85.1 1.38e-17   NR KAF0715399.1 112090 g31001 i0 50 1.97590361445783 82 38 98.8 1 247 2 21 99 KAF0715399.1 hypothetical protein AaE_011339 [Aphanomyces astaci] diamond 492 85.5 0.9953216374269 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27194077 27194077 PRJNA1111077_P_NODE_27122_length_262_cov_1.888889_g26901_i0 PRJNA1111077 27122 262 1.888889 4.94888918 Phytophthora rubi 129364 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.044   NR KAE9352664.1 129364 g26901 i0 40.8 0.812977099236641 71 42 81.3 0 236 24 236 306 KAE9352664.1 hypothetical protein PR003_g4274 [Phytophthora rubi] diamond 213 42.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora rubi
27194078 27194078 PRJNA1111077_P_NODE_27662_length_260_cov_1.647059_g27441_i0 PRJNA1111077 27662 260 1.647059 4.2823534 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 58.9 8.71e-8   NR KAJ0392923.1 114742 g27441 i0 39.7 0.9 78 47 90 0 6 239 108 185 KAJ0392923.1 hypothetical protein ATCC90586_004786 [Pythium insidiosum] diamond 234 58.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28290580 28290580 PRJNA1111077_P_NODE_27926_length_259_cov_1.655914_g27705_i0 PRJNA1111077 27926 259 1.655914 4.28881726 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 100 1.6000000000000002e-22   NR KAF1335695.1 82926 g27705 i0 73.8 9.03474903474904 65 17 75.3 0 60 254 974 1038 KAF1335695.1 Von willebrand factor a domain-containing protein 8, partial [Globisporangium splendens] diamond 2340 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28574868 28574868 PRJNA1111077_P_NODE_31087_length_250_cov_0.870056_g30866_i0 PRJNA1111077 31087 250 0.870056 2.17514 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 77.4 2.43e-14   NR XP_008616278.1 1156394 g30866 i0 51.9 2.844 79 38 94.8 0 239 3 79 157 XP_008616278.1 hypothetical protein SDRG_11999 [Saprolegnia diclina VS20] diamond 711 77.8 0.994858611825193 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
28954045 28954045 PRJNA1111077_P_NODE_27128_length_262_cov_1.740741_g26907_i0 PRJNA1111077 27128 262 1.740741 4.56074142 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 150 8.949999999999997e-42   NR KAH9078762.1 100861 g26907 i0 80.5 11.9541984732824 87 17 99.6 0 262 2 60 146 KAH9078762.1 hypothetical protein Ae201684P_019836 [Aphanomyces euteiches] diamond 3132 151 0.993377483443709 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
28994410 28994410 PRJNA1111077_P_NODE_32068_length_248_cov_0.880000_g31847_i0 PRJNA1111077 32068 248 0.88 2.1824 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 70.9 5.1e-12   NR KAH9116017.1 100861 g31847 i0 46.8 3.66532258064516 77 35 85.9 2 220 8 773 849 KAH9116017.1 hypothetical protein AeMF1_009987 [Aphanomyces euteiches] diamond 909 70.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29206594 29206594 PRJNA1111077_P_NODE_30849_length_250_cov_0.870056_g30628_i0 PRJNA1111077 30849 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 136 4.37e-35   NR KAI9916309.1 230839 g30628 i0 71.6 21.36 81 23 97.2 0 248 6 272 352 KAI9916309.1 hypothetical protein PsorP6_016740 [Peronosclerospora sorghi] diamond 5340 137 0.992700729927007 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
29869491 29869491 PRJNA1111077_P_NODE_30211_length_251_cov_0.865169_g29990_i0 PRJNA1111077 30211 251 0.865169 2.17157419 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 82.4 4.56e-16   NR KAF1781986.1 29920 g29990 i0 58.8 6.35856573705179 85 27 93.2 2 16 249 1159 1242 KAF1781986.1 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain [Phytophthora cactorum] diamond 1596 82.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
30153526 30153526 PRJNA1111077_P_NODE_12532_length_335_cov_1.175573_g12311_i0 PRJNA1111077 12532 335 1.175573 3.93816955 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 106 5.3399999999999996e-24   NR DAZ99440.1 4803 g12311 i0 68.5 2.60597014925373 73 23 65.4 0 333 115 389 461 DAZ99440.1 TPA: hypothetical protein N0F65_004073 [Lagenidium giganteum] diamond 873 107 0.990654205607477 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30501366 30501366 PRJNA1111077_P_NODE_14313_length_313_cov_1.125000_g14092_i0 PRJNA1111077 14313 313 1.125 3.52125 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 135 3.31e-34   NR TMW67939.1 41045 g14092 i0 62.5 7.94568690095847 104 39 99.7 0 2 313 802 905 TMW67939.1 hypothetical protein Poli38472_007611 [Pythium oligandrum] diamond 2487 136 0.992647058823529 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30604793 30604793 PRJNA1111077_P_NODE_11253_length_353_cov_1.367857_g11032_i0 PRJNA1111077 11253 353 1.367857 4.82853521 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 95.5 3.97e-20   NR XP_008610718.1 1156394 g11032 i0 45.5 0.841359773371105 99 54 84.1 0 297 1 346 444 XP_008610718.1 hypothetical protein, variant [Saprolegnia diclina VS20] diamond 297 95.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31996029 31996029 PRJNA1111077_P_NODE_23838_length_274_cov_1.482587_g23617_i0 PRJNA1111077 23838 274 1.482587 4.06228838 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 66.2 2.93e-10   NR GLE07445.1 114742 g23617 i0 42.1 1.66423357664234 76 43 82.1 1 226 2 32 107 GLE07445.1 hypothetical protein PINS_up017682 [Pythium insidiosum] diamond 456 66.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32272162 32272162 PRJNA1111077_P_NODE_21198_length_283_cov_1.347619_g20977_i0 PRJNA1111077 21198 283 1.347619 3.81376177 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 66.2 3.3e-10   NR KAG7399021.1 109152 g20977 i0 46.3 2.54416961130742 80 29 84.8 1 258 19 287 352 KAG7399021.1 hypothetical protein PHYBOEH_009912 [Phytophthora boehmeriae] diamond 720 66.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
32628305 32628305 PRJNA1111077_P_NODE_11940_length_343_cov_1.940741_g11719_i0 PRJNA1111077 11940 343 1.940741 6.65674163 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0269   NR DAZ94953.1 4803 g11719 i0 39.3 0.489795918367347 56 33 48.1 1 7 171 11 66 DAZ94953.1 TPA: hypothetical protein N0F65_000332 [Lagenidium giganteum] diamond 168 42.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;