RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111077", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29625129 29625129 PRJNA1111077_P_NODE_30650_length_250_cov_1.593220_g30429_i0 PRJNA1111077 30650 250 1.59322 3.98305 Methanobacteriaceae archaeon 2099680 Archaea Archaea 155 1.29e-45   NR NYB28030.1 2099680 g30429 i0 90.4 1.992 83 8 99.6 0 249 1 133 215 NYB28030.1 DNA repair and recombination protein RadB [Methanobacteriaceae archaeon] diamond 498 155 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
32344293 32344293 PRJNA1111077_P_NODE_29479_length_253_cov_1.622222_g29258_i0 PRJNA1111077 29479 253 1.622222 4.10422166 Methanobacteriaceae archaeon 2099680 Archaea Archaea 85.1 7.04e-18   NR HNR26619.1 2099680 g29258 i0 61.3 1.89723320158103 80 25 93.7 2 17 253 31 105 HNR26619.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 480 85.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;