RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1111077", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA1111077 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4041317 4041317 PRJNA1111077_P_NODE_15684_length_310_cov_2.822785_g15463_i0 PRJNA1111077 15684 310 2.822785 8.7506335 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 65.8 3.72e-6   NTclustered gi|123507304|ref|XM_001329360.1| 412133 g15463 i0 97.368 0.12258064516129 38 1 12 0 1 38 1724 1687 Trichomonas vaginalis G3 spectrin binding (TVAGG3_0695740), partial mRNA blastn 38 65.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
26814725 26814725 PRJNA1111077_P_NODE_34341_length_245_cov_0.895349_g34120_i0 PRJNA1111077 34341 245 0.895349 2.19360505 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 52.8 1.15e-5   NR KAJ5069915.1 1746090 g34120 i0 59.5 1.51836734693878 37 15 45.3 0 113 223 723 759 KAJ5069915.1 hypothetical protein M0811_11427 [Anaeramoeba ignava] diamond 372 52.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29278128 29278128 PRJNA1111077_P_NODE_35829_length_242_cov_1.508876_g35608_i0 PRJNA1111077 35829 242 1.508876 3.65147992 Kipferlia bialata 797122 Fornicata other_Eukaryota 76.3 5.48e-14   NR GIQ81893.1 797122 g35608 i0 45.7 1.1404958677686 92 34 94.2 1 14 241 259 350 GIQ81893.1 ornithine decarboxylase, partial [Kipferlia bialata] diamond 276 76.3 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
31806162 31806162 PRJNA1111077_P_NODE_27217_length_262_cov_1.365079_g26996_i0 PRJNA1111077 27217 262 1.365079 3.57650698 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 43.9 0.0184   NR KAJ5080068.1 1746090 g26996 i0 52.9 1.0763358778626 34 16 38.9 0 12 113 786 819 KAJ5080068.1 hypothetical protein M0811_14217 [Anaeramoeba ignava] diamond 282 43.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;