RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111077", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27067670 27067670 PRJNA1111077_P_NODE_35382_length_243_cov_0.905882_g35161_i0 PRJNA1111077 35382 243 0.905882 2.20129326 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 80.5 7.19e-17   NR HPD67670.1 2049428 g35161 i0 56.7 1.64197530864198 67 29 82.7 0 241 41 96 162 HPD67670.1 HAD hydrolase family protein [Ignavibacteriales bacterium] diamond 399 80.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28362505 28362505 PRJNA1111077_P_NODE_21466_length_282_cov_1.473684_g21245_i0 PRJNA1111077 21466 282 1.473684 4.15578888 Ignavibacteria bacterium 2053306 Bacteria Bacteria 160 9.53e-47   NR HWA06207.1 2053306 g21245 i0 76.3 3.95744680851064 93 22 98.9 0 281 3 51 143 HWA06207.1 bifunctional phosphoglucose/phosphomannose isomerase [Ignavibacteria bacterium] diamond 1116 160 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;